Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27055 | Canola | nucleus | 94.09 | 96.46 |
| CDY56151 | Canola | nucleus | 81.28 | 82.91 |
| CDY51833 | Canola | nucleus | 79.8 | 81.41 |
| AT5G52600.1 | Thale cress | nucleus | 77.34 | 78.11 |
| VIT_11s0016g05660.t01 | Wine grape | nucleus | 55.66 | 50.67 |
| VIT_11s0016g05690.t01 | Wine grape | nucleus | 52.22 | 47.53 |
| PGSC0003DMT400079416 | Potato | nucleus | 50.25 | 47.44 |
| Solyc07g008010.2.1 | Tomato | nucleus | 48.77 | 46.92 |
| CDY09882 | Canola | nucleus | 38.92 | 39.9 |
| CDX69561 | Canola | nucleus | 38.42 | 39.59 |
| CDX85583 | Canola | nucleus | 38.42 | 39.39 |
| CDX91023 | Canola | nucleus | 38.42 | 39.39 |
| CDY66972 | Canola | nucleus | 36.95 | 37.5 |
| CDX86461 | Canola | nucleus | 37.93 | 34.22 |
| CDX91687 | Canola | nucleus | 36.95 | 33.33 |
| GSMUA_Achr3P07950_001 | Banana | nucleus | 38.92 | 33.19 |
| CDY23616 | Canola | nucleus | 36.45 | 32.46 |
| CDY07085 | Canola | nucleus | 39.41 | 31.87 |
| CDY24177 | Canola | nucleus | 38.92 | 31.47 |
| CDX90721 | Canola | nucleus | 34.48 | 31.25 |
| CDY05057 | Canola | nucleus | 34.48 | 30.84 |
| CDY49363 | Canola | nucleus | 38.92 | 30.27 |
| CDX84119 | Canola | nucleus | 38.92 | 30.27 |
| CDY59254 | Canola | nucleus | 36.95 | 29.41 |
| CDX72510 | Canola | nucleus | 38.92 | 29.15 |
| CDY40652 | Canola | nucleus | 38.92 | 29.15 |
| CDY44571 | Canola | nucleus | 36.45 | 29.02 |
| GSMUA_Achr3P27700_001 | Banana | nucleus | 38.92 | 28.83 |
| CDX90285 | Canola | nucleus | 39.41 | 28.27 |
| CDY04798 | Canola | nucleus | 36.95 | 27.88 |
| CDY21378 | Canola | nucleus | 36.95 | 27.88 |
| CDX69102 | Canola | nucleus | 38.92 | 27.62 |
| CDX75478 | Canola | nucleus | 38.92 | 27.53 |
| CDY25747 | Canola | nucleus | 35.47 | 27.27 |
| CDY52797 | Canola | nucleus | 34.48 | 27.13 |
| CDX72743 | Canola | nucleus | 38.92 | 26.87 |
| CDY22416 | Canola | nucleus | 38.92 | 26.87 |
| CDY02243 | Canola | nucleus | 37.44 | 26.48 |
| CDY72116 | Canola | nucleus | 37.44 | 26.48 |
| CDY12520 | Canola | nucleus | 35.47 | 26.47 |
| CDY12092 | Canola | nucleus | 39.41 | 26.32 |
| CDY05636 | Canola | nucleus | 32.51 | 22.76 |
| CDY00035 | Canola | nucleus | 33.5 | 20.61 |
| CDX95725 | Canola | nucleus | 34.48 | 19.83 |
| CDX86237 | Canola | nucleus | 33.5 | 19.83 |
| CDX83327 | Canola | nucleus | 33.99 | 19.6 |
| CDX85403 | Canola | nucleus | 33.0 | 19.59 |
| CDY49609 | Canola | nucleus | 33.0 | 19.2 |
| CDY55384 | Canola | nucleus | 27.09 | 18.64 |
| CDX80105 | Canola | nucleus | 27.09 | 16.82 |
| CDY27486 | Canola | plastid | 3.45 | 2.97 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078JF76 | UniProt:A0A078JF76 | EnsemblPlants:CDY65324 | ProteinID:CDY65324 |
| ProteinID:CDY65324.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00045613001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF662 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF3E1F | SEG:seg |
Description
BnaC02g44890DBnaC02g44890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JF76]
Coordinates
chrLK034735:-:20824..21599
Molecular Weight (calculated)
23235.4 Da
IEP (calculated)
9.504
GRAVY (calculated)
-0.940
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKREEERKT HVKRGLWKPE EDMILRSYID THGEGNWADI SRRSGLKRGG KSCRLRWKNY LRPNIKRGGM TPQEQDLIIR MHKLLGNRWS LIAGRLPGRT
101: DNEVKNYWNT HLNKKSSSRK QNATESVEAS PWVDKPVMST EVRGSHGGGG GGGEGEEDTT TTWMEETNFF ARIESPLPLT AHHNPDTLLF DPSFAFTDCF
201: PLL
101: DNEVKNYWNT HLNKKSSSRK QNATESVEAS PWVDKPVMST EVRGSHGGGG GGGEGEEDTT TTWMEETNFF ARIESPLPLT AHHNPDTLLF DPSFAFTDCF
201: PLL
001: MECKREEGKS YVKRGLWKPE EDMILKSYVE THGEGNWADI SRRSGLKRGG KSCRLRWKNY LRPNIKRGSM SPQEQDLIIR MHKLLGNRWS LIAGRLPGRT
101: DNEVKNYWNT HLNKKPNSRR QNAPESIVGA TPFTDKPVMS TELRRSHGEG GEEESNTWME ETNHFGYDVH VGSPLPLISH YPDNTLVFDP CFSFTDFFPL
201: L
101: DNEVKNYWNT HLNKKPNSRR QNAPESIVGA TPFTDKPVMS TELRRSHGEG GEEESNTWME ETNHFGYDVH VGSPLPLISH YPDNTLVFDP CFSFTDFFPL
201: L
Arabidopsis Description
MYB82Transcription factor MYB82 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTF7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.