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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008740.1-P Field mustard nucleus 100.0 100.0
CDY09882 Canola nucleus 97.46 96.97
CDX91023 Canola nucleus 92.89 92.42
CDX85583 Canola nucleus 92.39 91.92
AT5G14750.1 Thale cress nucleus 92.89 90.15
VIT_14s0066g01220.t01 Wine grape nucleus 59.9 54.38
CDY66972 Canola nucleus 51.27 50.5
CDY44571 Canola nucleus 64.47 49.8
CDX86461 Canola nucleus 56.85 49.78
CDY27055 Canola nucleus 39.59 39.39
CDY65324 Canola nucleus 39.59 38.42
CDY56151 Canola nucleus 38.58 38.19
CDY51833 Canola nucleus 38.58 38.19
CDY23616 Canola nucleus 41.12 35.53
CDX91687 Canola nucleus 39.09 34.22
GSMUA_Achr3P07950_001 Banana nucleus 40.1 33.19
CDY07085 Canola nucleus 41.62 32.67
CDY24177 Canola nucleus 41.62 32.67
CDY05057 Canola nucleus 37.56 32.6
CDX90721 Canola nucleus 37.06 32.59
CDY59254 Canola nucleus 41.62 32.16
CDY04798 Canola nucleus 39.59 29.0
CDY21378 Canola nucleus 39.59 29.0
CDY25747 Canola nucleus 38.58 28.79
CDY49363 Canola nucleus 37.56 28.35
GSMUA_Achr3P27700_001 Banana nucleus 39.09 28.1
CDX84119 Canola nucleus 37.06 27.97
CDY12520 Canola nucleus 38.58 27.94
CDY40652 Canola nucleus 38.07 27.68
CDX72510 Canola nucleus 38.07 27.68
CDX90285 Canola nucleus 39.59 27.56
CDY22416 Canola nucleus 40.1 26.87
CDX72743 Canola nucleus 40.1 26.87
CDX75478 Canola nucleus 38.58 26.48
CDY52797 Canola nucleus 34.52 26.36
CDX69102 Canola nucleus 38.07 26.22
CDY12092 Canola nucleus 39.59 25.66
CDY02243 Canola nucleus 36.04 24.74
CDY72116 Canola nucleus 36.04 24.74
CDY05636 Canola nucleus 36.04 24.48
CDY00035 Canola nucleus 37.06 22.12
CDX86237 Canola nucleus 37.06 21.28
CDX85403 Canola nucleus 36.55 21.05
CDY49609 Canola nucleus 37.06 20.92
CDX95725 Canola nucleus 35.53 19.83
CDX83327 Canola nucleus 35.03 19.6
CDY55384 Canola nucleus 28.43 18.98
CDX80105 Canola nucleus 28.43 17.13
CDY27486 Canola plastid 4.57 3.81
Protein Annotations
EnsemblPlants:CDX69561EnsemblPlantsGene:GSBRNA2T00135569001Gene3D:1.10.10.60GO:A0A078BXU1GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0005488InterPro:Homeobox-like_sfInterPro:IPR017930InterPro:Myb_domInterPro:SANT/Myb
PANTHER:PTHR10641PANTHER:PTHR10641:SF625PFAM:PF00249PFscan:PS51294ProteinID:CDX69561ProteinID:CDX69561.1
SEG:segSMART:SM00717SUPFAM:SSF46689UniParc:UPI00025451A1MapMan:15.5.2.1:
Description
BnaA10g19100D
Coordinates
chrLK031790:+:819584..821067
Molecular Weight (calculated)
22967.3 Da
IEP (calculated)
9.327
GRAVY (calculated)
-0.938
Length
197 amino acids
Sequence
(BLAST)
001: MRKKVSSGEE GNNEYKKGLW TVEEDKILMD YVKAHGKGHW NRIAKKTGLK RCGKSCRLRW MNYLSPNVKR GNFTDQEEDL IIRLHKLLGN RWSLIAKRVP
101: GRTDNQVKNY WNTHLSKKLG IKDPKNKPSN GDIVYQINLT NPTETLEETK ISNINDNDEI QEDRHGSNYL SSLWVHDDTF ELSTLTNMME FLDGHCF
Best Arabidopsis Sequence Match ( AT5G14750.1 )
(BLAST)
001: MRKKVSSSGD EGNNEYKKGL WTVEEDKILM DYVKAHGKGH WNRIAKKTGL KRCGKSCRLR WMNYLSPNVK RGNFTEQEED LIIRLHKLLG NRWSLIAKRV
101: PGRTDNQVKN YWNTHLSKKL GIKDQKTKQS NGDIVYQINL PNPTETSEET KISNIVDNNN ILGDEIQEDH QGSNYLSSLW VHEDEFELST LTNMMDFIDG
201: HCF
Arabidopsis Description
WERWER1 [Source:UniProtKB/TrEMBL;Acc:A0A178UJM1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.