Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49363 | Canola | nucleus | 96.93 | 96.93 |
| AT5G35550.2 | Thale cress | nucleus | 63.98 | 63.98 |
| TraesCS3B01G515900.1 | Wheat | nucleus | 35.63 | 45.59 |
| VIT_11s0016g01310.t01 | Wine grape | nucleus | 37.16 | 44.09 |
| TraesCS4D01G319800.1 | Wheat | nucleus | 34.48 | 40.18 |
| CDY27055 | Canola | nucleus | 30.27 | 39.9 |
| CDY65324 | Canola | nucleus | 30.27 | 38.92 |
| CDX91687 | Canola | nucleus | 32.95 | 38.22 |
| CDY56151 | Canola | nucleus | 29.12 | 38.19 |
| HORVU3Hr1G100500.1 | Barley | nucleus | 37.16 | 38.04 |
| CDX90721 | Canola | nucleus | 32.57 | 37.95 |
| CDY51833 | Canola | nucleus | 28.74 | 37.69 |
| GSMUA_Achr10P... | Banana | nucleus | 39.85 | 37.41 |
| CDX91023 | Canola | nucleus | 28.35 | 37.37 |
| CDX85583 | Canola | nucleus | 28.35 | 37.37 |
| TraesCS5A01G495500.1 | Wheat | nucleus | 34.48 | 37.19 |
| CDX69561 | Canola | nucleus | 27.97 | 37.06 |
| CDY05057 | Canola | nucleus | 32.18 | 37.0 |
| GSMUA_Achr9P27380_001 | Banana | nucleus | 36.78 | 36.92 |
| TraesCS7D01G166500.1 | Wheat | nucleus | 35.63 | 36.9 |
| CDY09882 | Canola | nucleus | 27.97 | 36.87 |
| TraesCS4B01G323300.1 | Wheat | nucleus | 34.48 | 36.73 |
| TraesCS4D01G319700.1 | Wheat | nucleus | 34.1 | 36.63 |
| VIT_11s0016g01320.t01 | Wine grape | nucleus | 39.85 | 36.62 |
| TraesCS3D01G468400.1 | Wheat | nucleus | 37.16 | 36.6 |
| KRH06177 | Soybean | nucleus | 39.85 | 36.49 |
| KRH47594 | Soybean | nucleus | 37.93 | 36.13 |
| TraesCS7B01G070400.1 | Wheat | nucleus | 34.87 | 35.83 |
| TraesCS4D01G224500.1 | Wheat | nucleus | 31.03 | 35.06 |
| GSMUA_Achr6P04400_001 | Banana | nucleus | 36.78 | 34.91 |
| TraesCS7A01G165700.1 | Wheat | nucleus | 34.87 | 34.73 |
| CDY23616 | Canola | nucleus | 30.27 | 34.65 |
| Zm00001d044975_P001 | Maize | nucleus | 36.02 | 34.56 |
| EER92144 | Sorghum | nucleus | 38.7 | 34.35 |
| KRH02634 | Soybean | nucleus | 40.23 | 34.2 |
| Zm00001d037118_P001 | Maize | nucleus | 35.63 | 34.07 |
| KRH19274 | Soybean | nucleus | 39.46 | 33.88 |
| HORVU7Hr1G034630.1 | Barley | nucleus | 34.48 | 33.58 |
| CDY66972 | Canola | nucleus | 25.67 | 33.5 |
| HORVU4Hr1G063760.1 | Barley | nucleus | 29.5 | 33.33 |
| HORVU4Hr1G082610.1 | Barley | nucleus | 33.33 | 33.21 |
| CDY25747 | Canola | nucleus | 33.33 | 32.95 |
| CDY21378 | Canola | nucleus | 33.72 | 32.71 |
| CDY12520 | Canola | nucleus | 33.72 | 32.35 |
| CDY04798 | Canola | nucleus | 33.33 | 32.34 |
| CDY07085 | Canola | nucleus | 31.03 | 32.27 |
| CDY40652 | Canola | nucleus | 33.33 | 32.1 |
| CDY24177 | Canola | nucleus | 30.65 | 31.87 |
| CDX72510 | Canola | nucleus | 32.95 | 31.73 |
| CDY59254 | Canola | nucleus | 30.65 | 31.37 |
| CDX90285 | Canola | nucleus | 33.72 | 31.1 |
| CDX86461 | Canola | nucleus | 26.44 | 30.67 |
| CDX69102 | Canola | nucleus | 33.33 | 30.42 |
| CDX75478 | Canola | nucleus | 33.33 | 30.31 |
| CDX72743 | Canola | nucleus | 33.33 | 29.59 |
| CDY22416 | Canola | nucleus | 33.33 | 29.59 |
| Solyc12g049300.1.1 | Tomato | nucleus | 39.85 | 29.55 |
| CDY52797 | Canola | nucleus | 28.74 | 29.07 |
| CDY12092 | Canola | nucleus | 33.72 | 28.95 |
| CDY02243 | Canola | nucleus | 31.8 | 28.92 |
| CDY72116 | Canola | nucleus | 31.8 | 28.92 |
| CDY44571 | Canola | nucleus | 27.59 | 28.24 |
| CDX83327 | Canola | nucleus | 34.48 | 25.57 |
| CDY05636 | Canola | nucleus | 27.97 | 25.17 |
| CDX95725 | Canola | nucleus | 33.33 | 24.65 |
| CDY00035 | Canola | nucleus | 29.89 | 23.64 |
| CDX86237 | Canola | nucleus | 30.65 | 23.32 |
| CDX85403 | Canola | nucleus | 30.27 | 23.1 |
| CDY49609 | Canola | nucleus | 29.5 | 22.06 |
| CDY55384 | Canola | nucleus | 23.37 | 20.68 |
| CDX80105 | Canola | nucleus | 23.37 | 18.65 |
| CDY27486 | Canola | plastid | 6.51 | 7.2 |
| PGSC0003DMT400030322 | Potato | nucleus | 3.83 | 6.1 |
Protein Annotations
| EnsemblPlants:CDX84119 | EnsemblPlantsGene:GSBRNA2T00140118001 | Gene3D:1.10.10.60 | GO:A0A078D6X7 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF459 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX84119 | ProteinID:CDX84119.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EEAA42 | MapMan:15.5.2.1 | : | : |
Description
BnaC08g07960D
Coordinates
chrLK031835:-:1807246..1808347
Molecular Weight (calculated)
29731.4 Da
IEP (calculated)
9.495
GRAVY (calculated)
-0.717
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MMRKRESSRV KKEELNRGAW TDQEDKILKD YIMFHGEGKW STLPNQAGLK RCGKSCRLRW KNYLRPGIKR GNISSDEEEL IIRLHNLLGN SRWSLIAGRL
101: PGRTDNEIKN HWNSNLRKRL PKSQTNQQKS RKHSNNNNMN KVSVIRPKAI RCPKALTFQK QSSIGSTSLL TVKENVIDQQ ASSPSSLGDL KIDFDKIQSE
201: YLFSDLMDFD GLGCGNVMSL VSSDEVLGDY VSADASCLGN LDLNRPFTSC LQEDCLWDFN C
101: PGRTDNEIKN HWNSNLRKRL PKSQTNQQKS RKHSNNNNMN KVSVIRPKAI RCPKALTFQK QSSIGSTSLL TVKENVIDQQ ASSPSSLGDL KIDFDKIQSE
201: YLFSDLMDFD GLGCGNVMSL VSSDEVLGDY VSADASCLGN LDLNRPFTSC LQEDCLWDFN C
001: MGKRATTSVR REELNRGAWT DHEDKILRDY ITTHGEGKWS TLPNQAGLKR CGKSCRLRWK NYLRPGIKRG NISSDEEELI IRLHNLLGNR WSLIAGRLPG
101: RTDNEIKNHW NSNLRKRLPK TQTKQPKRIK HSTNNENNVC VIRTKAIRCS KTLLFSDLSL QKKSSTSPLP LKEQEMDQGG SSLMGDLEFD FDRIHSEFHF
201: PDLMDFDGLD CGNVTSLVSS NEILGELVPA QGNLDLNRPF TSCHHRGDDE DWLRDFTC
101: RTDNEIKNHW NSNLRKRLPK TQTKQPKRIK HSTNNENNVC VIRTKAIRCS KTLLFSDLSL QKKSSTSPLP LKEQEMDQGG SSLMGDLEFD FDRIHSEFHF
201: PDLMDFDGLD CGNVTSLVSS NEILGELVPA QGNLDLNRPF TSCHHRGDDE DWLRDFTC
Arabidopsis Description
TT2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT5G35550]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.