Factsheet for TraesCS7D01G166500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G070400.1	Wheat	nucleus	95.63	94.88
TraesCS7A01G165700.1	Wheat	nucleus	91.27	87.79
HORVU7Hr1G034630.1	Barley	nucleus	92.86	87.31
TraesCS4D01G319800.1	Wheat	nucleus	67.06	75.45
TraesCS4D01G319700.1	Wheat	nucleus	70.24	72.84
TraesCS4D01G224500.1	Wheat	nucleus	61.11	66.67
Zm00001d044975_P001	Maize	nucleus	65.08	60.29
Zm00001d037118_P001	Maize	nucleus	64.68	59.71
GSMUA_Achr9P27380_001	Banana	nucleus	47.22	45.77
GSMUA_Achr6P04400_001	Banana	nucleus	48.02	44.0
VIT_11s0016g01310.t01	Wine grape	nucleus	37.3	42.73
TraesCS3D01G468400.1	Wheat	nucleus	44.05	41.89
TraesCS7D01G272400.1	Wheat	nucleus	36.11	38.89
KRH02634	Soybean	nucleus	46.03	37.78
VIT_11s0016g01320.t01	Wine grape	nucleus	41.67	36.97
KRH19274	Soybean	nucleus	44.44	36.84
KRH06177	Soybean	nucleus	40.48	35.79
CDX84119	Canola	nucleus	36.9	35.63
TraesCS1D01G268900.1	Wheat	nucleus	34.52	35.22
Bra035532.1-P	Field mustard	nucleus	35.71	34.62
CDY49363	Canola	nucleus	35.71	34.48
KRH47594	Soybean	nucleus	37.3	34.31
TraesCS5D01G335700.1	Wheat	nucleus	33.73	31.95
TraesCS3D01G377300.1	Wheat	nucleus	34.13	31.73
TraesCS3D01G257800.1	Wheat	nucleus	34.13	31.73
AT5G35550.2	Thale cress	nucleus	30.95	29.89
TraesCS4D01G092900.1	Wheat	nucleus	32.54	28.37
Solyc12g049300.1.1	Tomato	nucleus	38.89	27.84
TraesCS5D01G128200.2	Wheat	nucleus	33.73	27.78
TraesCS1D01G021700.1	Wheat	nucleus	34.13	27.39
TraesCS4D01G187100.1	Wheat	nucleus	35.71	26.01
TraesCS1D01G020900.1	Wheat	nucleus	34.13	25.37
PGSC0003DMT400030322	Potato	nucleus	1.98	3.05

Protein Annotations

EnsemblPlants:TraesCS7D01G166500.1	EnsemblPlantsGene:TraesCS7D01G166500	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF459	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
TIGR:cd00167	MapMan:15.5.2.1	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:117242813..117245677

Molecular Weight (calculated)

26887.6 Da

IEP (calculated)

8.696

GRAVY (calculated)

-0.502

Length

252 amino acids

Sequence
(BLAST)

001: MGRRACCAKE GVKRGAWTSK EDEILASYVK AHGEGRWREL PQRAGLRRCG KSCRLRWLNY LRPNIKRGNI SDDEEELIVR LHGLLGNRWS IIAGRLPGRT
101: DNEIKNYWNS TLGRKALPAR PAIAAARTVA SGSSSSTGSA AAALSTSVPA VLHGAAPSSP AGAVWAPKPV RCTGGLFFRR EQETPPPAPV VEETRAGGDQ
201: EGDACSGSSS ETSSAEPCSS GSGGGDWMDD VRALASFLES DEEWLKSLHM AG

Best Arabidopsis Sequence Match ( AT5G35550.1 )
(BLAST)

001: MGKRATTSVR REELNRGAWT DHEDKILRDY ITTHGEGKWS TLPNQAGLKR CGKSCRLRWK NYLRPGIKRG NISSDEEELI IRLHNLLGNR WSLIAGRLPG
101: RTDNEIKNHW NSNLRKRLPK TQTKQPKRIK HSTNNENNVC VIRTKAIRCS KTLLFSDLSL QKKSSTSPLP LKEQEMDQGG SSLMGDLEFD FDRIHSEFHF
201: PDLMDFDGLD CGNVTSLVSS NEILGELVPA QGNLDLNRPF TSCHHRGDDE DWLRDFTC

Arabidopsis Description

TT2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT5G35550]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.