Factsheet for TraesCS7A01G165700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G166500.1	Wheat	nucleus	87.79	91.27
TraesCS7B01G070400.1	Wheat	nucleus	87.4	90.16
HORVU7Hr1G034630.1	Barley	nucleus	83.97	82.09
TraesCS5A01G495500.1	Wheat	nucleus	64.5	69.83
Zm00001d044975_P001	Maize	nucleus	59.54	57.35
Zm00001d037118_P001	Maize	nucleus	59.54	57.14
GSMUA_Achr6P04400_001	Banana	nucleus	47.33	45.09
GSMUA_Achr9P27380_001	Banana	nucleus	44.27	44.62
VIT_11s0016g01310.t01	Wine grape	nucleus	36.26	43.18
TraesCS7A01G272100.1	Wheat	nucleus	33.97	37.08
KRH02634	Soybean	nucleus	41.98	35.83
KRH19274	Soybean	nucleus	41.22	35.53
VIT_11s0016g01320.t01	Wine grape	nucleus	38.17	35.21
KRH06177	Soybean	nucleus	38.17	35.09
CDX84119	Canola	nucleus	34.73	34.87
TraesCS5A01G111300.1	Wheat	nucleus	32.44	34.84
TraesCS1A01G268800.1	Wheat	nucleus	32.82	34.82
KRH47594	Soybean	nucleus	36.26	34.67
Bra035532.1-P	Field mustard	nucleus	33.97	34.23
CDY49363	Canola	nucleus	33.97	34.1
TraesCS3A01G384400.1	Wheat	nucleus	33.59	32.96
TraesCS5A01G329900.1	Wheat	nucleus	32.82	32.09
TraesCS3A01G257800.1	Wheat	nucleus	32.06	31.7
AT5G35550.2	Thale cress	nucleus	29.39	29.5
TraesCS4A01G217800.1	Wheat	nucleus	32.06	29.17
Solyc12g049300.1.1	Tomato	nucleus	37.4	27.84
TraesCS1A01G021500.1	Wheat	nucleus	32.06	24.93
TraesCS4A01G118400.1	Wheat	nucleus	32.44	24.57
PGSC0003DMT400030322	Potato	nucleus	1.15	1.83

Protein Annotations

EnsemblPlants:TraesCS7A01G165700.1	EnsemblPlantsGene:TraesCS7A01G165700	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF459	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
TIGR:cd00167	MapMan:15.5.2.1	:	:	:	:

Description

No Description!

Coordinates

chr7A:+:121397941..121398822

Molecular Weight (calculated)

27959.8 Da

IEP (calculated)

9.902

GRAVY (calculated)

-0.561

Length

262 amino acids

Sequence
(BLAST)

001: MGRRACCAKE GVKRGAWTSK EDEILASYVK AHGEGRWREL PQRAGLRRCG KSCRLRWLNY LRPNIKRGNI SDDEEELIVR LHGLLGNRWS IIAGRLPGRT
101: DNEIKNYWNS TLGRKALPAR PTIAAARTVV ATPVASGSSS STGSAAAPLS TSVPALLHAA APSSPAAAVW APKPVRCTGG LFFRREQETP PPAPVVEETR
201: AGGEEGDACS GSSSSETSSA EPCSSGSGGG DWMDDVRAWR HSSSPTRNGS SPCTWPVKTS HT

Best Arabidopsis Sequence Match ( AT1G22640.1 )
(BLAST)

001: MGRSPCCEKA HMNKGAWTKE EDQLLVDYIR KHGEGCWRSL PRAAGLQRCG KSCRLRWMNY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH

Arabidopsis Description

MYB3MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.