Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G020900.1 | Wheat | nucleus | 91.99 | 91.45 |
| KRG94424 | Soybean | nucleus | 18.1 | 66.3 |
| TraesCS1B01G023400.1 | Wheat | nucleus | 62.91 | 66.04 |
| TraesCS1B01G049700.1 | Wheat | nucleus | 62.61 | 65.73 |
| TraesCS4A01G118400.1 | Wheat | nucleus | 65.88 | 64.16 |
| TraesCS1B01G023500.1 | Wheat | nucleus | 60.53 | 63.55 |
| Zm00001d028842_P001 | Maize | nucleus | 47.18 | 47.46 |
| Zm00001d047671_P001 | Maize | nucleus | 47.77 | 46.8 |
| EER92385 | Sorghum | nucleus | 48.37 | 45.79 |
| TraesCS5A01G111300.1 | Wheat | nucleus | 26.41 | 36.48 |
| TraesCS7A01G272100.1 | Wheat | nucleus | 25.82 | 36.25 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.83 | 35.62 |
| TraesCS1A01G268800.1 | Wheat | nucleus | 25.82 | 35.22 |
| Solyc06g009710.2.1 | Tomato | nucleus | 30.86 | 35.02 |
| TraesCS5A01G495500.1 | Wheat | nucleus | 24.63 | 34.3 |
| KRH31822 | Soybean | nucleus | 34.72 | 34.21 |
| PGSC0003DMT400011167 | Potato | nucleus | 27.3 | 34.07 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 32.05 | 33.64 |
| TraesCS5A01G329900.1 | Wheat | nucleus | 26.71 | 33.58 |
| Solyc12g049350.1.1 | Tomato | nucleus | 29.08 | 33.45 |
| PGSC0003DMT400018841 | Potato | nucleus | 29.97 | 33.33 |
| TraesCS3A01G384400.1 | Wheat | nucleus | 26.41 | 33.33 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 36.2 | 32.88 |
| AT3G62610.1 | Thale cress | nucleus | 33.23 | 32.65 |
| KRH69237 | Soybean | nucleus | 35.61 | 32.34 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 35.01 | 32.15 |
| TraesCS7A01G165700.1 | Wheat | nucleus | 24.93 | 32.06 |
| Bra037419.1-P | Field mustard | nucleus | 32.05 | 31.49 |
| Bra036145.1-P | Field mustard | nucleus | 32.34 | 31.41 |
| TraesCS4A01G217800.1 | Wheat | nucleus | 26.71 | 31.25 |
| Solyc01g079620.2.1 | Tomato | nucleus | 31.16 | 31.07 |
| AT2G47460.1 | Thale cress | nucleus | 34.12 | 31.0 |
| KRG96503 | Soybean | nucleus | 32.34 | 30.79 |
| AT5G49330.1 | Thale cress | nucleus | 31.16 | 30.7 |
| KRH37017 | Soybean | nucleus | 30.27 | 30.54 |
| Bra000453.1-P | Field mustard | nucleus | 33.83 | 30.32 |
| KRH11988 | Soybean | nucleus | 29.67 | 30.3 |
| TraesCS3A01G257800.1 | Wheat | nucleus | 23.74 | 30.19 |
| KRH68241 | Soybean | nucleus | 32.05 | 30.08 |
| KRH50769 | Soybean | nucleus | 29.67 | 29.67 |
| PGSC0003DMT400023322 | Potato | nucleus | 31.75 | 29.48 |
| VIT_05s0077g01360.t01 | Wine grape | nucleus | 32.64 | 28.72 |
| KRH02323 | Soybean | nucleus | 29.08 | 28.0 |
| Bra004456.1-P | Field mustard | nucleus | 28.49 | 26.3 |
| CDY27486 | Canola | plastid | 7.12 | 10.17 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G021500.1 | EnsemblPlantsGene:TraesCS1A01G021500 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb-rel_proteinP_C | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF203 | PFAM:PF00249 | PFAM:PF06640 | PFscan:PS51294 | SEG:seg |
| SMART:SM00717 | SUPFAM:SSF46689 | TIGR:cd00167 | MapMan:15.5.2.1 | : | : |
Description
No Description!
Coordinates
chr1A:-:10227258..10241556
Molecular Weight (calculated)
37463.0 Da
IEP (calculated)
6.790
GRAVY (calculated)
-0.660
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCQKL GLKQGKWTKE EDGILANYIA QHGEGSWRSL PKNAGLLRCG KSCRLRWLNY LRGGLKRGNF SKEEDDLIVK LHATNGNRWS LIASHLPGRT
101: DNEIKNYWNL HLGRQFHSFK QTYTANNSTT ITIDINKLSA TNRKRRGGQA PGQLPRSSTK KQPTPKPAKP QDGSSPIGAT SLASCLPQGN QDQNQPINIT
201: VSHTFGEPYS GNGICHMVRD NIDQNGGVLE PNSAIDWIEL LEPNNSMNHI GLLEDESEME ALLSSMDLTT SGHSVIEHGG QSWLEDLLDM GWEGFASHLW
301: GQSAQNDLLQ TTMPHAMTGS EVREFEQFVS WLLSDEF
101: DNEIKNYWNL HLGRQFHSFK QTYTANNSTT ITIDINKLSA TNRKRRGGQA PGQLPRSSTK KQPTPKPAKP QDGSSPIGAT SLASCLPQGN QDQNQPINIT
201: VSHTFGEPYS GNGICHMVRD NIDQNGGVLE PNSAIDWIEL LEPNNSMNHI GLLEDESEME ALLSSMDLTT SGHSVIEHGG QSWLEDLLDM GWEGFASHLW
301: GQSAQNDLLQ TTMPHAMTGS EVREFEQFVS WLLSDEF
001: MGRSPCCEKA HMNKGAWTKE EDQLLVDYIR KHGEGCWRSL PRAAGLQRCG KSCRLRWMNY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
Arabidopsis Description
MYB3MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.