Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY55384 | Canola | nucleus | 51.48 | 64.75 |
| CDX80105 | Canola | nucleus | 52.29 | 59.33 |
| Bra004456.1-P | Field mustard | nucleus | 55.8 | 56.71 |
| AT3G62610.1 | Thale cress | nucleus | 47.44 | 51.31 |
| AT1G35515.1 | Thale cress | nucleus | 24.8 | 43.4 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.23 | 39.69 |
| AT4G09460.1 | Thale cress | nucleus | 24.53 | 38.56 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 38.54 | 38.54 |
| TraesCS1D01G021700.1 | Wheat | nucleus | 32.61 | 38.53 |
| HORVU4Hr1G054420.3 | Barley | nucleus | 35.31 | 38.53 |
| AT5G49330.1 | Thale cress | nucleus | 35.31 | 38.3 |
| Os01t0305900-01 | Rice | nucleus | 32.61 | 38.17 |
| AT5G52600.1 | Thale cress | nucleus | 20.22 | 37.31 |
| TraesCS4B01G186000.1 | Wheat | nucleus | 34.5 | 36.99 |
| TraesCS4A01G118400.1 | Wheat | nucleus | 34.5 | 36.99 |
| Zm00001d028842_P001 | Maize | nucleus | 32.88 | 36.42 |
| TraesCS4D01G187100.1 | Wheat | nucleus | 33.96 | 36.42 |
| TraesCS1B01G023400.1 | Wheat | nucleus | 31.27 | 36.14 |
| TraesCS1B01G049700.1 | Wheat | nucleus | 31.0 | 35.83 |
| AT4G34990.1 | Thale cress | nucleus | 26.42 | 35.77 |
| Zm00001d047671_P001 | Maize | nucleus | 33.15 | 35.76 |
| OQU86782 | Sorghum | nucleus | 34.77 | 35.73 |
| AT2G16720.1 | Thale cress | nucleus | 25.88 | 35.69 |
| AT5G14750.1 | Thale cress | nucleus | 19.41 | 35.47 |
| KRH37017 | Soybean | nucleus | 31.81 | 35.33 |
| TraesCS1B01G005200.1 | Wheat | nucleus | 31.54 | 35.24 |
| TraesCS1B01G023500.1 | Wheat | nucleus | 30.46 | 35.2 |
| Zm00001d040621_P002 | Maize | nucleus | 33.42 | 35.03 |
| AT1G22640.1 | Thale cress | nucleus | 24.26 | 35.02 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 30.19 | 34.89 |
| KRH11988 | Soybean | nucleus | 31.0 | 34.85 |
| AT4G38620.1 | Thale cress | nucleus | 26.42 | 34.75 |
| KRH50769 | Soybean | nucleus | 31.54 | 34.72 |
| TraesCS1A01G021500.1 | Wheat | nucleus | 31.0 | 34.12 |
| AT3G13540.1 | Thale cress | nucleus | 22.64 | 33.73 |
| KRH02323 | Soybean | nucleus | 31.81 | 33.71 |
| TraesCS1D01G020900.1 | Wheat | nucleus | 30.73 | 33.63 |
| EER92385 | Sorghum | nucleus | 32.08 | 33.43 |
| VIT_05s0077g01360.t01 | Wine grape | nucleus | 33.15 | 32.11 |
| AT5G40330.1 | Thale cress | nucleus | 18.87 | 31.96 |
| AT3G27920.1 | Thale cress | nucleus | 18.06 | 29.39 |
| AT5G35550.2 | Thale cress | nucleus | 20.22 | 28.74 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:819359 | ProteinID:AAC62864.1 | ProteinID:ABB03913.1 | ProteinID:AEC10843.1 |
| EMBL:AF062864 | ArrayExpress:AT2G47460 | EnsemblPlantsGene:AT2G47460 | RefSeq:AT2G47460 | TAIR:AT2G47460 | RefSeq:AT2G47460-TAIR-G |
| EnsemblPlants:AT2G47460.1 | TAIR:AT2G47460.1 | EMBL:AY060588 | EMBL:AY142067 | EMBL:AY519580 | Unigene:At.10899 |
| GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 |
| GO:GO:0009723 | GO:GO:0009733 | GO:GO:0009813 | GO:GO:0009987 | GO:GO:0010224 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045893 | GO:GO:0051555 |
| GO:GO:1900386 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | Symbol:MYB12 | InterPro:Myb_dom | RefSeq:NP_182268.1 |
| UniProt:O22264 | PFAM:PF00249 | PO:PO:0000037 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF203 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000AAAD6 | SEG:seg | : |
Description
MYB12Transcription factor MYB12 [Source:UniProtKB/Swiss-Prot;Acc:O22264]
Coordinates
chr2:+:19476326..19479597
Molecular Weight (calculated)
41395.9 Da
IEP (calculated)
4.856
GRAVY (calculated)
-0.771
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKV GIKRGRWTAE EDQILSNYIQ SNGEGSWRSL PKNAGLKRCG KSCRLRWINY LRSDLKRGNI TPEEEELVVK LHSTLGNRWS LIAGHLPGRT
101: DNEIKNYWNS HLSRKLHNFI RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN ADVAGADKEA LMVESSGAEA
201: ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN
301: DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD DESALVAWLL S
101: DNEIKNYWNS HLSRKLHNFI RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN ADVAGADKEA LMVESSGAEA
201: ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN
301: DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD DESALVAWLL S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.