Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G049700.1 | Wheat | nucleus | 94.39 | 94.39 |
| TraesCS1B01G023500.1 | Wheat | nucleus | 91.59 | 91.59 |
| KRG94424 | Soybean | nucleus | 20.56 | 71.74 |
| TraesCS1B01G005200.1 | Wheat | nucleus | 70.09 | 67.77 |
| TraesCS4B01G186000.1 | Wheat | nucleus | 68.54 | 63.58 |
| TraesCS1A01G021500.1 | Wheat | nucleus | 66.04 | 62.91 |
| TraesCS1D01G020900.1 | Wheat | nucleus | 64.8 | 61.36 |
| Zm00001d028842_P001 | Maize | nucleus | 50.78 | 48.66 |
| Zm00001d047671_P001 | Maize | nucleus | 50.78 | 47.38 |
| EER92385 | Sorghum | nucleus | 49.84 | 44.94 |
| TraesCS3B01G515900.1 | Wheat | nucleus | 25.86 | 40.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.14 | 36.25 |
| KRH31822 | Soybean | nucleus | 37.69 | 35.38 |
| TraesCS7B01G169900.1 | Wheat | nucleus | 25.86 | 35.32 |
| Solyc06g009710.2.1 | Tomato | nucleus | 31.78 | 34.34 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 39.56 | 34.23 |
| AT3G62610.1 | Thale cress | nucleus | 36.45 | 34.11 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 33.64 | 33.64 |
| TraesCS1B01G279400.1 | Wheat | nucleus | 25.86 | 33.6 |
| TraesCS5B01G330100.1 | Wheat | nucleus | 27.41 | 33.46 |
| PGSC0003DMT400011167 | Potato | nucleus | 28.04 | 33.33 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 38.01 | 33.24 |
| Bra037419.1-P | Field mustard | nucleus | 35.51 | 33.24 |
| Bra036145.1-P | Field mustard | nucleus | 35.83 | 33.14 |
| TraesCS7B01G070400.1 | Wheat | nucleus | 26.17 | 33.07 |
| AT5G49330.1 | Thale cress | nucleus | 34.89 | 32.75 |
| KRH11988 | Soybean | nucleus | 33.64 | 32.73 |
| PGSC0003DMT400018841 | Potato | nucleus | 30.84 | 32.67 |
| KRH50769 | Soybean | nucleus | 34.27 | 32.64 |
| KRH37017 | Soybean | nucleus | 33.96 | 32.63 |
| KRG96503 | Soybean | nucleus | 35.83 | 32.49 |
| Solyc12g049350.1.1 | Tomato | nucleus | 29.59 | 32.42 |
| KRH69237 | Soybean | nucleus | 37.38 | 32.34 |
| TraesCS3B01G416400.1 | Wheat | nucleus | 26.79 | 32.21 |
| TraesCS4B01G323300.1 | Wheat | nucleus | 24.3 | 31.84 |
| KRH68241 | Soybean | nucleus | 35.2 | 31.48 |
| AT2G47460.1 | Thale cress | nucleus | 36.14 | 31.27 |
| Solyc01g079620.2.1 | Tomato | nucleus | 32.71 | 31.07 |
| KRH02323 | Soybean | nucleus | 33.64 | 30.86 |
| Bra000453.1-P | Field mustard | nucleus | 36.14 | 30.85 |
| TraesCS5B01G119300.1 | Wheat | nucleus | 25.23 | 29.78 |
| PGSC0003DMT400023322 | Potato | nucleus | 33.33 | 29.48 |
| VIT_05s0077g01360.t01 | Wine grape | nucleus | 34.89 | 29.24 |
| Bra004456.1-P | Field mustard | nucleus | 31.15 | 27.4 |
| TraesCS3B01G290600.1 | Wheat | nucleus | 23.05 | 27.21 |
| TraesCS4B01G096500.1 | Wheat | nucleus, plastid | 25.86 | 21.78 |
| CDY27486 | Canola | plastid | 8.72 | 11.86 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G023400.1 | EnsemblPlantsGene:TraesCS1B01G023400 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb-rel_proteinP_C | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF203 | PFAM:PF00249 | PFAM:PF06640 | PFscan:PS51294 | SMART:SM00717 |
| SUPFAM:SSF46689 | TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : |
Description
No Description!
Coordinates
chr1B:-:10568513..10572456
Molecular Weight (calculated)
35487.5 Da
IEP (calculated)
4.535
GRAVY (calculated)
-0.560
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKV GLKQGRWTAE EDGILTKYIA QHGEGSWRSL PKNAGLLRCG KSCRLRWLNY LSDGVKRGNF SKEEDNLIVK LHATLGSRWS VIASYLPGRT
101: DNEIKNYWNA HLSRQIYNFR HVYAAISETT VTIDVDKLSA TTKRRGGKAP RSNTKMQPVP EPTKSKEGSS PVDTISTASS QADPDRDQQP INNMTCAVPC
201: SEEAMVMDPV NQNGMVQLMG TNCSDDSVNQ IGVFEEESEM EALLSCIDDD MSASVLTGIE QGGHSPRVED LLDMDWEGFA SHLWDQPSQS DLLQTAELQA
301: MTGSESDELE SFVSWLLSDD A
101: DNEIKNYWNA HLSRQIYNFR HVYAAISETT VTIDVDKLSA TTKRRGGKAP RSNTKMQPVP EPTKSKEGSS PVDTISTASS QADPDRDQQP INNMTCAVPC
201: SEEAMVMDPV NQNGMVQLMG TNCSDDSVNQ IGVFEEESEM EALLSCIDDD MSASVLTGIE QGGHSPRVED LLDMDWEGFA SHLWDQPSQS DLLQTAELQA
301: MTGSESDELE SFVSWLLSDD A
001: MGRAPCCEKV GIKKGRWTAE EDRTLSDYIQ SNGEGSWRSL PKNAGLKRCG KSCRLRWINY LRSDIKRGNI TPEEEDVIVK LHSTLGTRWS TIASNLPGRT
101: DNEIKNYWNS HLSRKLHGYF RKPTVANTVE NAPPPPKRRP GRTSRSAMKP KFILNPKNHK TPNSFKANKS DIVLPTTTIE NGEGDKEDAL MVLSSSSLSG
201: AEEPGLGPCG YGDDGDCNPS INGDDGALCL NDDIFDSCFL LDDSHAVHVS SCESNNVKNS EPYGGMSVGH KNIETMADDF VDWDFVWREG QTLWDEKEDL
301: DSVLSRLLDG EEMESEIRQR DSNDFGEPLD IDEENKMAAW LLS
101: DNEIKNYWNS HLSRKLHGYF RKPTVANTVE NAPPPPKRRP GRTSRSAMKP KFILNPKNHK TPNSFKANKS DIVLPTTTIE NGEGDKEDAL MVLSSSSLSG
201: AEEPGLGPCG YGDDGDCNPS INGDDGALCL NDDIFDSCFL LDDSHAVHVS SCESNNVKNS EPYGGMSVGH KNIETMADDF VDWDFVWREG QTLWDEKEDL
301: DSVLSRLLDG EEMESEIRQR DSNDFGEPLD IDEENKMAAW LLS
Arabidopsis Description
MYB11Transcription factor MYB11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZK4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.