Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G217800.1 | Wheat | nucleus | 72.44 | 95.83 |
| TraesCS4D01G092900.1 | Wheat | nucleus | 72.44 | 95.5 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.5 | 80.54 |
| HORVU4Hr1G018360.2 | Barley | nucleus | 76.38 | 79.73 |
| GSMUA_Achr2P20600_001 | Banana | nucleus | 33.86 | 73.71 |
| Os11t0180900-00 | Rice | nucleus | 55.38 | 71.53 |
| GSMUA_Achr6P07260_001 | Banana | mitochondrion | 34.12 | 65.33 |
| GSMUA_Achr3P22200_001 | Banana | nucleus | 36.22 | 63.59 |
| GSMUA_Achr10P... | Banana | nucleus | 35.96 | 63.13 |
| GSMUA_Achr5P26000_001 | Banana | nucleus | 34.65 | 62.86 |
| GSMUA_Achr6P25420_001 | Banana | nucleus | 38.32 | 61.6 |
| GSMUA_Achr8P32480_001 | Banana | nucleus | 32.28 | 61.5 |
| Zm00001d004744_P001 | Maize | nucleus | 43.57 | 60.36 |
| Zm00001d053060_P001 | Maize | nucleus | 44.09 | 58.33 |
| TraesCS1B01G279400.1 | Wheat | nucleus | 37.53 | 57.89 |
| AT1G35515.1 | Thale cress | nucleus | 31.23 | 56.13 |
| GSMUA_Achr5P17010_001 | Banana | nucleus | 35.43 | 56.02 |
| GSMUA_Achr9P08600_001 | Banana | nucleus | 39.37 | 55.15 |
| TraesCS7B01G169900.1 | Wheat | nucleus | 33.86 | 54.89 |
| CDX90721 | Canola | nucleus | 31.76 | 54.02 |
| Bra000680.1-P | Field mustard | nucleus | 31.76 | 54.02 |
| OQU83016 | Sorghum | nucleus | 44.62 | 53.97 |
| TraesCS3B01G416400.1 | Wheat | nucleus | 37.8 | 53.93 |
| TraesCS5B01G119300.1 | Wheat | nucleus | 38.06 | 53.31 |
| TraesCS5B01G330100.1 | Wheat | nucleus | 36.75 | 53.23 |
| CDY05057 | Canola | nucleus | 31.5 | 52.86 |
| AT4G09460.1 | Thale cress | nucleus | 32.55 | 52.54 |
| Solyc06g065100.2.1 | Tomato | nucleus | 35.96 | 49.1 |
| GSMUA_Achr6P12930_001 | Banana | nucleus | 36.75 | 48.95 |
| PGSC0003DMT400080427 | Potato | nucleus | 36.48 | 48.77 |
| KRH54016 | Soybean | nucleus | 37.27 | 47.18 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 35.7 | 46.9 |
| KRH63931 | Soybean | nucleus | 37.01 | 46.69 |
| TraesCS3B01G515900.1 | Wheat | nucleus | 22.57 | 42.16 |
| TraesCS3B01G290600.1 | Wheat | nucleus | 24.15 | 33.82 |
| TraesCS4B01G323300.1 | Wheat | nucleus | 21.52 | 33.47 |
| TraesCS7B01G070400.1 | Wheat | nucleus | 22.31 | 33.46 |
| TraesCS4B01G186000.1 | Wheat | nucleus | 23.88 | 26.3 |
| TraesCS1B01G023500.1 | Wheat | nucleus | 21.78 | 25.86 |
| TraesCS1B01G023400.1 | Wheat | nucleus | 21.78 | 25.86 |
| TraesCS1B01G049700.1 | Wheat | nucleus | 21.52 | 25.55 |
| TraesCS1B01G005200.1 | Wheat | nucleus | 22.05 | 25.3 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G096500.1 | EnsemblPlantsGene:TraesCS4B01G096500 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF951 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:100576173..100577527
Molecular Weight (calculated)
41103.9 Da
IEP (calculated)
10.052
GRAVY (calculated)
-0.580
Length
381 amino acids
Sequence
(BLAST)
(BLAST)
001: MGPRSAPPPS SSSPPPRIKP TTHPRLPSLS SSLSLKKLAR SHAPPTPHRS SFPSDPPTTT TAYIISPLLV CGAGGISSCL RRYRIRAGGM GRSPCCEKAH
101: TNKGAWTKEE DQRLIAYIKA HGEGCWRSLP KAAGLLRCGK SCRLRWINYL RPDLKRGNFT EEEDELIIKL HELLGNKWSL IAGRLPGRTD NEIKNYWNTH
201: IKRKLLARGM DPHTHRPLNA IAAAAMPAQQ QQQLRAAHER HFAAATPGGH HLQPQQQDPF AALSSSAEPA CSHSSDDEPA GSATPPPPSR RHLGIDLNLS
301: ISLAPYQPDD PAVKQEAATT GSQNNATTST SAVCMCLNRL GFQGAGEGCR CGGASSVPMQ QQASSAQRMF RFIAPLEGGG Q
101: TNKGAWTKEE DQRLIAYIKA HGEGCWRSLP KAAGLLRCGK SCRLRWINYL RPDLKRGNFT EEEDELIIKL HELLGNKWSL IAGRLPGRTD NEIKNYWNTH
201: IKRKLLARGM DPHTHRPLNA IAAAAMPAQQ QQQLRAAHER HFAAATPGGH HLQPQQQDPF AALSSSAEPA CSHSSDDEPA GSATPPPPSR RHLGIDLNLS
301: ISLAPYQPDD PAVKQEAATT GSQNNATTST SAVCMCLNRL GFQGAGEGCR CGGASSVPMQ QQASSAQRMF RFIAPLEGGG Q
001: MGRSPCCEKA HMNKGAWTKE EDQLLVDYIR KHGEGCWRSL PRAAGLQRCG KSCRLRWMNY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
Arabidopsis Description
MYB3MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.