Factsheet for AT1G35515.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	nucleus	49.53	70.47
CDX90721	Canola	nucleus	68.87	65.18
Bra000680.1-P	Field mustard	nucleus	68.87	65.18
CDY05057	Canola	nucleus	68.4	63.88
AT4G09460.1	Thale cress	nucleus	70.75	63.56
GSMUA_Achr2P20600_001	Banana	nucleus	52.36	63.43
GSMUA_Achr6P07260_001	Banana	mitochondrion	51.89	55.28
GSMUA_Achr10P...	Banana	nucleus	55.66	54.38
GSMUA_Achr3P22200_001	Banana	nucleus	55.19	53.92
EES16743	Sorghum	nucleus	53.3	52.56
GSMUA_Achr8P32480_001	Banana	nucleus	49.53	52.5
GSMUA_Achr5P26000_001	Banana	nucleus	50.47	50.95
Zm00001d041853_P001	Maize	nucleus	52.36	49.12
TraesCS1D01G268900.1	Wheat	nucleus	56.13	48.18
TraesCS1B01G279400.1	Wheat	nucleus	55.66	47.77
TraesCS1A01G268800.1	Wheat	nucleus	55.66	47.77
Zm00001d012255_P001	Maize	nucleus	56.13	47.41
HORVU1Hr1G074260.1	Barley	nucleus	56.13	47.41
GSMUA_Achr6P25420_001	Banana	nucleus	52.83	47.26
Zm00001d042665_P001	Maize	nucleus	58.02	46.95
Os05t0429900-01	Rice	nucleus	57.55	46.92
AT1G22640.1	Thale cress	nucleus	56.6	46.69
Zm00001d010201_P001	Maize	nucleus	53.77	45.78
GSMUA_Achr5P17010_001	Banana	nucleus	51.89	45.64
TraesCS5A01G111300.1	Wheat	nucleus	52.36	45.49
EES01839	Sorghum	nucleus	57.55	45.35
Zm00001d038338_P001	Maize	nucleus	55.19	45.35
TraesCS3A01G384400.1	Wheat	nucleus	56.6	44.94
TraesCS3B01G416400.1	Wheat	nucleus	56.6	44.94
KXG22070	Sorghum	nucleus	55.19	44.66
HORVU3Hr1G082210.1	Barley	nucleus	56.6	44.44
TraesCS3D01G377300.1	Wheat	nucleus	56.6	44.28
GSMUA_Achr9P08600_001	Banana	nucleus	54.72	42.65
Zm00001d004744_P001	Maize	nucleus	55.19	42.55
AT2G16720.1	Thale cress	nucleus	53.77	42.38
Os01t0874300-01	Rice	extracellular, nucleus	57.08	42.16
HORVU5Hr1G036900.1	Barley	nucleus	52.36	42.05
AT4G38620.1	Thale cress	nucleus	55.19	41.49
TraesCS4A01G217800.1	Wheat	nucleus	56.13	41.32
AT4G34990.1	Thale cress	nucleus	53.3	41.24
Solyc06g065100.2.1	Tomato	nucleus	54.25	41.22
TraesCS5B01G119300.1	Wheat	nucleus	52.83	41.18
TraesCS4D01G092900.1	Wheat	nucleus	56.13	41.18
GSMUA_Achr5P01180_001	Banana	nucleus	50.0	40.77
PGSC0003DMT400080427	Potato	nucleus	54.25	40.35
Zm00001d053060_P001	Maize	nucleus	54.72	40.28
GSMUA_Achr6P12930_001	Banana	nucleus	53.3	39.51
Os11t0180900-00	Rice	nucleus	54.72	39.32
OQU78830	Sorghum	nucleus	51.89	39.01
GSMUA_Achr10P...	Banana	nucleus	51.42	38.38
OQU83016	Sorghum	nucleus	55.19	37.14
TraesCS5D01G128200.2	Wheat	nucleus	52.83	36.6
AT5G14750.1	Thale cress	nucleus	33.96	35.47
AT3G13540.1	Thale cress	nucleus	39.62	33.73
AT5G40330.1	Thale cress	nucleus	33.49	32.42
AT5G52600.1	Thale cress	nucleus	30.66	32.34
HORVU4Hr1G018360.2	Barley	nucleus	55.66	32.33
TraesCS4B01G096500.1	Wheat	nucleus, plastid	56.13	31.23
AT3G27920.1	Thale cress	nucleus	33.02	30.7
AT5G35550.2	Thale cress	nucleus	33.96	27.59
AT3G62610.1	Thale cress	nucleus	42.45	26.24
AT5G49330.1	Thale cress	nucleus	41.98	26.02
AT2G47460.1	Thale cress	nucleus	43.4	24.8

Protein Annotations

Gene3D:1.10.10.60	MapMan:15.5.2.1	EntrezGene:840446	ProteinID:AAF79367.1	ProteinID:AEE31803.1	EMBL:AF207991
ArrayExpress:AT1G35515	EnsemblPlantsGene:AT1G35515	RefSeq:AT1G35515	TAIR:AT1G35515	RefSeq:AT1G35515-TAIR-G	EnsemblPlants:AT1G35515.1
TAIR:AT1G35515.1	EMBL:AY519561	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006357	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009751	GO:GO:0009987	GO:GO:0030154
GO:GO:0043565	GO:GO:0044212	Symbol:HOS10	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom
RefSeq:NP_849749.1	PFAM:PF00249	PO:PO:0000191	PO:PO:0000293	PFscan:PS51294	PANTHER:PTHR10641
PANTHER:PTHR10641:SF947	UniProt:Q9SDS8	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689	UniParc:UPI00000A5D47

Description

MYB8Transcription factor MYB8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDS8]

Coordinates

chr1:+:13077890..13080265

Molecular Weight (calculated)

24239.8 Da

IEP (calculated)

8.899

GRAVY (calculated)

-0.765

Length

212 amino acids

Sequence
(BLAST)

001: MGRSPCCEKA HMNKGAWTKE EDQRLIDYIR NHGEGSWRSL PKSVGLLRCG KSCRLRWINY LRPDLKRGNF TDGEEQIIVK LHSLFGNKWS LIAGKLPGRT
101: DNEIKNYWNT HIKRKLLNRG IDPKTHGSII EPKTTSFHPR NEDLKSTFPG SVKLKMETSC ENCASTSGTT TDEDLRLSVD CDYRYDHLDK ELNLDLTLGY
201: SPTRFVGVGS CY

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.