Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 41.92 | 73.15 |
| GSMUA_Achr2P20600_001 | Banana | nucleus | 45.0 | 66.86 |
| GSMUA_Achr11P... | Banana | nucleus | 42.31 | 65.87 |
| GSMUA_Achr9P24180_001 | Banana | nucleus | 42.69 | 64.16 |
| GSMUA_Achr8P33900_001 | Banana | nucleus | 46.92 | 60.1 |
| GSMUA_Achr6P07260_001 | Banana | mitochondrion | 43.85 | 57.29 |
| GSMUA_Achr8P32480_001 | Banana | nucleus | 43.85 | 57.0 |
| GSMUA_Achr5P26000_001 | Banana | nucleus | 45.77 | 56.67 |
| GSMUA_Achr1P02420_001 | Banana | nucleus | 42.31 | 56.41 |
| GSMUA_Achr4P25710_001 | Banana | nucleus | 41.54 | 56.25 |
| GSMUA_Achr3P22200_001 | Banana | nucleus | 46.54 | 55.76 |
| GSMUA_Achr10P... | Banana | nucleus | 45.0 | 53.92 |
| GSMUA_Achr1P26520_001 | Banana | nucleus | 48.46 | 52.28 |
| GSMUA_Achr6P25420_001 | Banana | nucleus | 46.92 | 51.48 |
| GSMUA_Achr1P07550_001 | Banana | nucleus | 46.54 | 51.05 |
| CDX90721 | Canola | nucleus | 43.46 | 50.45 |
| Bra000680.1-P | Field mustard | nucleus | 43.46 | 50.45 |
| AT1G35515.1 | Thale cress | nucleus | 40.77 | 50.0 |
| CDY05057 | Canola | nucleus | 43.46 | 49.78 |
| GSMUA_Achr5P17010_001 | Banana | nucleus | 45.77 | 49.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.38 | 47.42 |
| AT4G09460.1 | Thale cress | nucleus | 42.69 | 47.03 |
| GSMUA_Achr10P... | Banana | nucleus | 36.15 | 45.63 |
| GSMUA_Achr9P08600_001 | Banana | nucleus | 47.31 | 45.22 |
| Solyc06g065100.2.1 | Tomato | nucleus | 46.92 | 43.73 |
| PGSC0003DMT400080427 | Potato | nucleus | 46.92 | 42.81 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 46.92 | 42.07 |
| GSMUA_Achr10P... | Banana | nucleus | 45.38 | 41.55 |
| GSMUA_Achr6P12930_001 | Banana | nucleus | 45.38 | 41.26 |
| GSMUA_Achr6P09620_001 | Banana | nucleus | 31.15 | 40.5 |
| KRH54016 | Soybean | nucleus | 46.15 | 39.87 |
| KRH63931 | Soybean | nucleus | 46.15 | 39.74 |
| GSMUA_Achr3P21000_001 | Banana | nucleus | 36.54 | 37.4 |
| GSMUA_Achr3P07950_001 | Banana | nucleus | 30.38 | 33.19 |
| GSMUA_Achr2P19380_001 | Banana | nucleus | 29.62 | 31.56 |
| GSMUA_Achr9P16040_001 | Banana | nucleus | 31.15 | 31.52 |
| GSMUA_Achr10P... | Banana | nucleus | 33.46 | 31.3 |
| GSMUA_Achr9P27380_001 | Banana | nucleus | 31.15 | 31.15 |
| GSMUA_Achr11P... | Banana | nucleus | 28.08 | 31.06 |
| GSMUA_Achr6P04400_001 | Banana | nucleus | 32.69 | 30.91 |
| GSMUA_Achr7P18550_001 | Banana | nucleus | 30.77 | 30.3 |
| GSMUA_Achr2P17960_001 | Banana | nucleus | 30.0 | 30.23 |
| GSMUA_Achr3P07940_001 | Banana | nucleus | 32.69 | 30.14 |
| GSMUA_Achr8P14540_001 | Banana | nucleus | 30.0 | 30.0 |
| GSMUA_Achr3P27700_001 | Banana | nucleus | 31.15 | 29.56 |
| GSMUA_Achr7P18560_001 | Banana | nucleus | 30.38 | 29.37 |
| GSMUA_Achr6P14840_001 | Banana | nucleus | 32.31 | 28.97 |
| GSMUA_Achr4P21700_001 | Banana | nucleus | 25.77 | 28.88 |
| GSMUA_Achr10P... | Banana | nucleus | 32.31 | 28.19 |
| GSMUA_Achr8P22690_001 | Banana | nucleus | 31.15 | 27.93 |
| GSMUA_Achr7P13700_001 | Banana | nucleus | 31.54 | 26.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.54 | 25.62 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 31.54 | 25.55 |
| GSMUA_Achr5P06530_001 | Banana | nucleus | 33.46 | 23.2 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 32.31 | 22.64 |
| GSMUA_Achr6P02530_001 | Banana | nucleus | 30.38 | 21.88 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P01180_001 | EnsemblPlants:GSMUA_Achr5T01180_001 | EnsemblPlantsGene:GSMUA_Achr5G01180_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF741 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002959773 | UniProt:M0SUP7 | MapMan:15.5.2.1 | : | : |
Description
MYB6 [Source:GMGC_GENE;Acc:GSMUA_Achr5G01180_001]
Coordinates
chr5:+:678774..684321
Molecular Weight (calculated)
28799.8 Da
IEP (calculated)
10.732
GRAVY (calculated)
-0.647
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKA HTNKGTWTKE EDQRLISYVR THGEGCWRSL PKAAGLLRCG KSCRLRWINY LRPDLKRGSF TDEEDELIIK LHGSLGNKWS AIAARLPGRS
101: DNEIKNHWNT NIKRKLVGRG LDPRTHRPVH GGSHDSQSSG RKKALPKPST VKNTPCVDRI TGQTIPKGFV FSRGKLGLPR DLELDLRKLM LPHTTLKLKA
201: TKGTAQNLDK LVNVAGPMGV THFLIPSNSK EHAPFACCKD TARSNINLSC AISNSVGRGE
101: DNEIKNHWNT NIKRKLVGRG LDPRTHRPVH GGSHDSQSSG RKKALPKPST VKNTPCVDRI TGQTIPKGFV FSRGKLGLPR DLELDLRKLM LPHTTLKLKA
201: TKGTAQNLDK LVNVAGPMGV THFLIPSNSK EHAPFACCKD TARSNINLSC AISNSVGRGE
001: MGRSPCCEKA HMNKGAWTKE EDQLLVDYIR KHGEGCWRSL PRAAGLQRCG KSCRLRWMNY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
Arabidopsis Description
MYB3MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.