Factsheet for GSMUA_Achr3P21000_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	nucleus	56.3	73.71
VIT_17s0000g02650.t01	Wine grape	nucleus	41.73	64.24
GSMUA_AchrUn_...	Banana	nucleus	37.4	63.76
Solyc05g008250.1.1	Tomato	nucleus	44.09	62.92
PGSC0003DMT400078477	Potato	nucleus	44.09	62.92
GSMUA_Achr9P24180_001	Banana	nucleus	41.34	60.69
GSMUA_Achr2P20600_001	Banana	nucleus	40.94	59.43
GSMUA_Achr11P...	Banana	nucleus	38.98	59.28
GSMUA_Achr6P09620_001	Banana	nucleus	45.28	57.5
VIT_01s0011g04760.t01	Wine grape	nucleus	50.79	57.33
VIT_14s0006g01620.t01	Wine grape	nucleus	50.79	56.58
GSMUA_Achr10P...	Banana	nucleus	45.67	56.31
KRG89277	Soybean	nucleus	48.43	55.16
VIT_17s0000g02660.t01	Wine grape	nucleus	48.43	53.71
KRH50345	Soybean	nucleus	48.82	53.68
KRH15114	Soybean	nucleus	39.37	53.48
GSMUA_Achr1P02420_001	Banana	nucleus	40.16	52.31
GSMUA_Achr6P07260_001	Banana	mitochondrion	40.94	52.26
GSMUA_Achr8P33900_001	Banana	nucleus	41.34	51.72
KRH73023	Soybean	nucleus	44.49	51.36
GSMUA_Achr10P...	Banana	nucleus	42.91	50.23
GSMUA_Achr5P26000_001	Banana	nucleus	41.34	50.0
GSMUA_Achr3P22200_001	Banana	nucleus	41.73	48.85
GSMUA_Achr8P32480_001	Banana	nucleus	38.19	48.5
GSMUA_Achr4P25710_001	Banana	nucleus	34.65	45.83
GSMUA_Achr1P26520_001	Banana	nucleus	42.91	45.23
GSMUA_Achr1P07550_001	Banana	nucleus	42.13	45.15
GSMUA_Achr6P25420_001	Banana	nucleus	42.13	45.15
GSMUA_Achr5P17010_001	Banana	nucleus	41.73	43.98
GSMUA_Achr9P08600_001	Banana	nucleus	42.52	39.71
GSMUA_Achr5P01180_001	Banana	nucleus	37.4	36.54
GSMUA_Achr6P12930_001	Banana	nucleus	40.94	36.36
GSMUA_Achr3P07950_001	Banana	nucleus	33.86	36.13
GSMUA_Achr10P...	Banana	nucleus	39.37	35.21
GSMUA_Achr11P...	Banana	nucleus	32.28	34.89
GSMUA_Achr9P16040_001	Banana	nucleus	34.25	33.85
GSMUA_Achr3P27700_001	Banana	nucleus	35.83	33.21
GSMUA_Achr4P21700_001	Banana	nucleus	29.92	32.76
GSMUA_Achr2P19380_001	Banana	nucleus	31.1	32.38
GSMUA_Achr7P18550_001	Banana	nucleus	33.46	32.2
GSMUA_Achr3P07940_001	Banana	nucleus	35.43	31.91
GSMUA_Achr2P17960_001	Banana	nucleus	31.89	31.4
GSMUA_Achr8P14540_001	Banana	nucleus	31.89	31.15
GSMUA_Achr7P18560_001	Banana	nucleus	32.68	30.86
GSMUA_Achr9P27380_001	Banana	nucleus	31.5	30.77
GSMUA_Achr8P22690_001	Banana	nucleus	35.04	30.69
GSMUA_Achr6P04400_001	Banana	nucleus	32.68	30.18
GSMUA_Achr10P...	Banana	nucleus	32.68	29.86
GSMUA_Achr6P14840_001	Banana	nucleus	33.86	29.66
GSMUA_Achr10P...	Banana	nucleus	34.25	29.19
GSMUA_Achr7P13700_001	Banana	nucleus	33.46	27.69
GSMUA_Achr5P21250_001	Banana	nucleus	32.68	25.86
GSMUA_AchrUn_...	Banana	nucleus	32.28	25.62
GSMUA_Achr5P06530_001	Banana	nucleus	35.83	24.27
GSMUA_Achr6P02530_001	Banana	nucleus	33.86	23.82
GSMUA_Achr8P10470_001	Banana	nucleus	31.89	21.83

Protein Annotations

EnsemblPlants:GSMUA_Achr3P21000_001	EnsemblPlants:GSMUA_Achr3T21000_001	EnsemblPlantsGene:GSMUA_Achr3G21000_001	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF507	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI00029569AF	UniProt:M0SGG6	MapMan:15.5.2.1	:	:

Description

Myb-related protein 308 [Source:GMGC_GENE;Acc:GSMUA_Achr3G21000_001]

Coordinates

chr3:+:22054692..22055880

Molecular Weight (calculated)

28949.9 Da

IEP (calculated)

9.844

GRAVY (calculated)

-0.471

Length

254 amino acids

Sequence
(BLAST)

001: MTAWAQREIY RSAWEHVPCV HPAPVLRTYL GKTRYLRSLS PATILRRHLR SWHLFLSPCL CSTAMRSPCC DKQGTNRGAW SKEEDQKLID YVGVHGEGCW
101: RALPKAAGLL RCGKSCRLRW INYLRPDVKR GNFQEDEADL IIKLHALLGN RWSLIAGRLP GRTDNEVKNY WNSHLRKKLT SMGIDPDNHR VARKNMSFWH
201: LNSTVGDDRV RCAGSGSLEE NSSGLPDLNL DLTICIPSSV MEKNTANPTL LLFR

Best Arabidopsis Sequence Match ( AT1G22640.1 )
(BLAST)

001: MGRSPCCEKA HMNKGAWTKE EDQLLVDYIR KHGEGCWRSL PRAAGLQRCG KSCRLRWMNY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH

Arabidopsis Description

MYB3MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.