Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g02650.t01 | Wine grape | nucleus | 48.25 | 66.67 |
| VIT_01s0011g04760.t01 | Wine grape | nucleus | 63.6 | 64.44 |
| Solyc05g008250.1.1 | Tomato | nucleus | 50.0 | 64.04 |
| GSMUA_AchrUn_... | Banana | nucleus | 54.39 | 63.92 |
| PGSC0003DMT400078477 | Potato | nucleus | 49.56 | 63.48 |
| KRH15114 | Soybean | nucleus | 49.12 | 59.89 |
| KRH73023 | Soybean | nucleus | 56.14 | 58.18 |
| VIT_17s0000g02660.t01 | Wine grape | nucleus | 54.82 | 54.59 |
| GSMUA_Achr10P... | Banana | nucleus | 48.68 | 53.88 |
| GSMUA_Achr6P09620_001 | Banana | nucleus | 45.61 | 52.0 |
| GSMUA_Achr3P21000_001 | Banana | nucleus | 56.58 | 50.79 |
| VIT_04s0023g03710.t01 | Wine grape | nucleus | 49.12 | 46.28 |
| VIT_03s0038g02310.t01 | Wine grape | nucleus | 49.56 | 45.02 |
| VIT_18s0117g00200.t01 | Wine grape | nucleus | 44.3 | 43.35 |
| VIT_18s0117g00210.t01 | Wine grape | nucleus | 45.18 | 39.92 |
| VIT_04s0008g01870.t01 | Wine grape | nucleus | 32.89 | 38.07 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 48.25 | 37.93 |
| VIT_14s0066g01220.t01 | Wine grape | nucleus | 34.65 | 36.41 |
| VIT_11s0016g01310.t01 | Wine grape | nucleus | 35.09 | 36.36 |
| VIT_09s0002g01380.t01 | Wine grape | nucleus | 32.02 | 35.96 |
| VIT_17s0000g08480.t01 | Wine grape | nucleus | 33.33 | 35.19 |
| VIT_01s0127g00730.t01 | Wine grape | nucleus | 33.77 | 35.0 |
| VIT_04s0008g01840.t01 | Wine grape | nucleus | 33.77 | 34.07 |
| VIT_15s0046g00170.t01 | Wine grape | nucleus | 41.23 | 32.87 |
| VIT_04s0008g01800.t01 | Wine grape | nucleus | 38.16 | 32.83 |
| VIT_11s0016g05660.t01 | Wine grape | nucleus | 32.02 | 32.74 |
| VIT_11s0016g05690.t01 | Wine grape | nucleus | 31.14 | 31.84 |
| VIT_13s0084g00530.t01 | Wine grape | nucleus | 35.96 | 31.18 |
| VIT_04s0008g01810.t01 | Wine grape | nucleus | 36.4 | 30.07 |
| VIT_09s0002g01410.t01 | Wine grape | nucleus | 39.04 | 30.07 |
| VIT_11s0016g01320.t01 | Wine grape | nucleus | 36.84 | 29.58 |
| VIT_06s0004g00570.t01 | Wine grape | nucleus, plastid | 39.91 | 29.17 |
| VIT_04s0008g01830.t01 | Wine grape | nucleus | 35.96 | 29.08 |
| VIT_08s0007g07230.t01 | Wine grape | nucleus | 40.79 | 29.06 |
| VIT_04s0008g01820.t01 | Wine grape | nucleus | 37.72 | 28.96 |
| VIT_11s0016g01300.t01 | Wine grape | nucleus | 38.16 | 28.9 |
| VIT_09s0002g01400.t01 | Wine grape | nucleus | 41.23 | 27.41 |
| VIT_05s0077g01360.t01 | Wine grape | nucleus | 40.35 | 24.02 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 38.6 | 23.98 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100251783 | wikigene:100251783 | MapMan:15.5.2.1 | ProteinID:CBI33548 | ProteinID:CBI33548.3 |
| UniProt:D7TSS6 | EMBL:FN596245 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| EMBL:KM046932 | EntrezGene:LOC100251783 | wikigene:LOC100251783 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF507 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00015C96F8 |
| ArrayExpress:VIT_14s0006g01620 | EnsemblPlantsGene:VIT_14s0006g01620 | EnsemblPlants:VIT_14s0006g01620.t01 | unigene:Vvi.19515 | RefSeq:XP_002273328 | RefSeq:XP_002273328.1 |
| SEG:seg | : | : | : | : | : |
Description
R2R3 MYB transcription factor [Source:UniProtKB/TrEMBL;Acc:D7TSS6]
Coordinates
chr14:-:17967924..17969453
Molecular Weight (calculated)
25424.2 Da
IEP (calculated)
8.888
GRAVY (calculated)
-0.640
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKPCCDKKD TTKGAWSKQE DQRLIDYIKT HGEGCWRSLP KAAGLHRCGK SCRLRWINYL RPDLKRGNFG QDEEDLIIKL HALLGNRWSL IAGRLPGRTD
101: NEVKNYWNSH IRKKLINMGI DPNNHRVNQS FAAPLNRCAS AATMSSGSMT GACDNKSLKP SADNDPLSDS ASGLEDEISA SLDLNLDLTI AIPASSLTDV
201: IDKKRQDTKS IFSREVEGDA NPTLILFR
101: NEVKNYWNSH IRKKLINMGI DPNNHRVNQS FAAPLNRCAS AATMSSGSMT GACDNKSLKP SADNDPLSDS ASGLEDEISA SLDLNLDLTI AIPASSLTDV
201: IDKKRQDTKS IFSREVEGDA NPTLILFR
001: MGRSPCCEKA HTNKGAWTKE EDERLVAYIK AHGEGCWRSL PKAAGLLRCG KSCRLRWINY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIRRKLINRG IDPTSHRPIQ ESSASQDSKP TQLEPVTSNT INISFTSAPK VETFHESISF PGKSEKISML TFKEEKDECP VQEKFPDLNL
201: ELRISLPDDV DRLQGHGKST TPRCFKCSLG MINGMECRCG RMRCDVVGGS SKGSDMSNGF DFLGLAKKET TSLLGFRSLE MK
101: DNEIKNYWNT HIRRKLINRG IDPTSHRPIQ ESSASQDSKP TQLEPVTSNT INISFTSAPK VETFHESISF PGKSEKISML TFKEEKDECP VQEKFPDLNL
201: ELRISLPDDV DRLQGHGKST TPRCFKCSLG MINGMECRCG RMRCDVVGGS SKGSDMSNGF DFLGLAKKET TSLLGFRSLE MK
Arabidopsis Description
MYB4Transcription repressor MYB4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.