Factsheet for VIT_09s0002g01380.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_04s0008g01870.t01	Wine grape	nucleus	66.5	68.53
VIT_17s0000g02650.t01	Wine grape	nucleus	35.47	43.64
VIT_11s0016g01310.t01	Wine grape	nucleus	40.89	37.73
VIT_04s0008g01840.t01	Wine grape	nucleus	41.38	37.17
GSMUA_Achr11P...	Banana	nucleus	40.89	35.32
GSMUA_Achr4P21700_001	Banana	nucleus	39.41	34.48
VIT_01s0011g04760.t01	Wine grape	nucleus	37.44	33.78
VIT_11s0016g05660.t01	Wine grape	nucleus	36.95	33.63
VIT_17s0000g08480.t01	Wine grape	nucleus	35.47	33.33
VIT_14s0066g01220.t01	Wine grape	nucleus	35.47	33.18
VIT_04s0008g01800.t01	Wine grape	nucleus	42.86	32.83
VIT_11s0016g05690.t01	Wine grape	nucleus	35.96	32.74
VIT_04s0008g01820.t01	Wine grape	nucleus	47.78	32.66
GSMUA_Achr2P17960_001	Banana	nucleus	41.38	32.56
VIT_01s0127g00730.t01	Wine grape	nucleus	34.98	32.27
VIT_04s0023g03710.t01	Wine grape	nucleus	38.42	32.23
VIT_14s0006g01620.t01	Wine grape	nucleus	35.96	32.02
VIT_04s0008g01810.t01	Wine grape	nucleus	43.35	31.88
GSMUA_Achr8P14540_001	Banana	nucleus	40.39	31.54
VIT_17s0000g02660.t01	Wine grape	nucleus	35.47	31.44
VIT_13s0084g00530.t01	Wine grape	nucleus	39.9	30.8
VIT_11s0016g01300.t01	Wine grape	nucleus	45.32	30.56
VIT_18s0117g00200.t01	Wine grape	nucleus	34.98	30.47
VIT_03s0038g02310.t01	Wine grape	nucleus	37.44	30.28
VIT_11s0016g01320.t01	Wine grape	nucleus	41.87	29.93
VIT_15s0046g00170.t01	Wine grape	nucleus	40.89	29.02
VIT_18s0117g00210.t01	Wine grape	nucleus	36.45	28.68
VIT_09s0002g01400.t01	Wine grape	nucleus	46.31	27.41
VIT_04s0008g01830.t01	Wine grape	nucleus	37.93	27.3
VIT_06s0004g00570.t01	Wine grape	nucleus, plastid	39.9	25.96
VIT_09s0002g01410.t01	Wine grape	nucleus	37.44	25.68
VIT_07s0130g00040.t01	Wine grape	nucleus	35.96	25.17
VIT_08s0007g07230.t01	Wine grape	nucleus	39.41	25.0
VIT_07s0005g01210.t01	Wine grape	nucleus	37.44	20.71
VIT_05s0077g01360.t01	Wine grape	nucleus	37.44	19.84

Protein Annotations

Gene3D:1.10.10.60	EntrezGene:100249722	wikigene:100249722	MapMan:15.5.2.1	ProteinID:CBI35878	ProteinID:CBI35878.3
UniProt:D7TZT2	EMBL:FN596494	GO:GO:0000981	GO:GO:0001135	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006357	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0030154	GO:GO:0043565	GO:GO:0044212
InterPro:Homeobox-like_sf	InterPro:IPR017930	EntrezGene:LOC100249722	wikigene:LOC100249722	InterPro:Myb_dom	PFAM:PF00249
PFscan:PS51294	PANTHER:PTHR10641	PANTHER:PTHR10641:SF558	InterPro:SANT/Myb	SMART:SM00717	SUPFAM:SSF46689
UniParc:UPI00015C8584	ArrayExpress:VIT_09s0002g01380	EnsemblPlantsGene:VIT_09s0002g01380	EnsemblPlants:VIT_09s0002g01380.t01	RefSeq:XP_002273991	RefSeq:XP_002273991.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr9:+:1161830..1162708

Molecular Weight (calculated)

23310.8 Da

IEP (calculated)

8.747

GRAVY (calculated)

-0.784

Length

203 amino acids

Sequence
(BLAST)

001: MAEKEVKSIG SVKDVRKEMN RGAWTAEEDR KLAEVIEVHG AKRWKMIATT AGLNRCGKSC RLRWMNYLRP NIKRGNISDQ EEDLILRLHK LLGNRWSLIA
101: GRLPGRTDNE IKNYWNSHLS KKIKQEKQSG GSTRGCSKLQ RTRVVEEVNV VEVKREDTSN GGDQCSKMSF NVDEFFDFSE EGPLNLEWVS QFLELDEGLC
201: HPS

Best Arabidopsis Sequence Match ( AT2G16720.1 )
(BLAST)

001: MGRSPCCEKE HMNKGAWTKE EDERLVSYIK SHGEGCWRSL PRAAGLLRCG KSCRLRWINY LRPDLKRGNF THDEDELIIK LHSLLGNKWS LIAARLPGRT
101: DNEIKNYWNT HIKRKLLSKG IDPATHRGIN EAKISDLKKT KDQIVKDVSF VTKFEETDKS GDQKQNKYIR NGLVCKEERV VVEEKIGPDL NLELRISPPW
201: QNQREISTCT ASRFYMENDM ECSSETVKCQ TENSSSISYS SIDISSSNVG YDFLGLKTRI LDFRSLEMK

Arabidopsis Description

MYB7Transcription factor MYB7 [Source:UniProtKB/Swiss-Prot;Acc:Q42379]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.