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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • nucleus 5
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_11s0016g01310.t01 Wine grape nucleus 37.71 50.91
VIT_04s0008g01870.t01 Wine grape nucleus 33.33 50.25
VIT_17s0000g02650.t01 Wine grape nucleus 27.61 49.7
VIT_13s0084g00530.t01 Wine grape nucleus 42.76 48.29
VIT_09s0002g01380.t01 Wine grape nucleus 32.66 47.78
VIT_04s0008g01800.t01 Wine grape nucleus 42.09 47.17
VIT_04s0008g01840.t01 Wine grape nucleus 34.34 45.13
VIT_11s0016g01300.t01 Wine grape nucleus 43.1 42.52
VIT_11s0016g01320.t01 Wine grape nucleus 40.07 41.9
VIT_04s0008g01810.t01 Wine grape nucleus 36.7 39.49
VIT_01s0011g04760.t01 Wine grape nucleus 29.29 38.67
VIT_09s0002g01400.t01 Wine grape nucleus 43.77 37.9
VIT_14s0006g01620.t01 Wine grape nucleus 28.96 37.72
VIT_11s0016g05660.t01 Wine grape nucleus 28.28 37.67
VIT_17s0000g08480.t01 Wine grape nucleus 26.6 36.57
VIT_04s0023g03710.t01 Wine grape nucleus 29.63 36.36
GSMUA_Achr7P18550_001 Banana nucleus 31.99 35.98
VIT_14s0066g01220.t01 Wine grape nucleus 26.26 35.94
VIT_04s0008g01830.t01 Wine grape nucleus 34.01 35.82
GSMUA_Achr7P18560_001 Banana nucleus 32.32 35.69
VIT_18s0117g00200.t01 Wine grape nucleus 27.95 35.62
VIT_03s0038g02310.t01 Wine grape nucleus 29.63 35.06
VIT_11s0016g05690.t01 Wine grape nucleus 26.26 34.98
VIT_17s0000g02660.t01 Wine grape nucleus 26.94 34.93
Solyc12g049300.1.1 Tomato nucleus 41.08 34.66
VIT_15s0046g00170.t01 Wine grape nucleus 33.33 34.62
VIT_01s0127g00730.t01 Wine grape nucleus 24.92 33.64
VIT_18s0117g00210.t01 Wine grape nucleus 27.95 32.17
VIT_09s0002g01410.t01 Wine grape nucleus 30.3 30.41
VIT_07s0130g00040.t01 Wine grape nucleus 28.62 29.31
VIT_06s0004g00570.t01 Wine grape nucleus, plastid 29.29 27.88
VIT_08s0007g07230.t01 Wine grape nucleus 28.96 26.88
GSMUA_Achr6P02530_001 Banana nucleus 31.31 25.76
VIT_07s0005g01210.t01 Wine grape nucleus 29.63 23.98
VIT_05s0077g01360.t01 Wine grape nucleus 29.63 22.98
PGSC0003DMT400030322 Potato nucleus 3.03 5.49
Protein Annotations
Gene3D:1.10.10.60EntrezGene:100244051wikigene:100244051MapMan:15.5.2.1ProteinID:CCB46604ProteinID:CCB46604.1
UniProt:F6H3S1EMBL:FN595231GO:GO:0000981GO:GO:0001135GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0003700GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0006139GO:GO:0006357GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0030154GO:GO:0043565GO:GO:0044212InterPro:Homeobox-like_sfInterPro:IPR017930
EntrezGene:LOC100244051wikigene:LOC100244051InterPro:Myb_domPFAM:PF00249PFscan:PS51294PANTHER:PTHR10641
PANTHER:PTHR10641:SF459InterPro:SANT/MybSMART:SM00717SUPFAM:SSF46689UniParc:UPI0002109A77ArrayExpress:VIT_04s0008g01820
EnsemblPlantsGene:VIT_04s0008g01820EnsemblPlants:VIT_04s0008g01820.t01RefSeq:XP_002279900RefSeq:XP_002279900.1SEG:seg:
Description
No Description!
Coordinates
chr4:+:1456404..1464354
Molecular Weight (calculated)
33833.1 Da
IEP (calculated)
8.784
GRAVY (calculated)
-0.780
Length
297 amino acids
Sequence
(BLAST)
001: MGRAPCCSKE GLNRGAWTAL EDKILSDYIK VHGEGKWRNI PKQAGLKRCG KSCRLRWLNY LRPDIKRGNI SLEEEDLIIR LHKLLGNRWA LIAGRLPGRT
101: DNEIKNYWNT TLRKKVNGKQ PNHESKDEKK KSSIKESIEK NPPPSTMVES QVIRTKASRC NKVFISQPQK LQNLDNGVAA KEDSMNCRPK AIPSNTSGED
201: DSFNGTMDFD VGEFFMSDIS DSDLWKLFQF DNNSNTVKED GNNNDGFPFS SADQPGLFSE EMIKDWIRDD EILRIIYLGL FTSLNKDGLI IQPNFKS
Best Arabidopsis Sequence Match ( AT5G35550.1 )
(BLAST)
001: MGKRATTSVR REELNRGAWT DHEDKILRDY ITTHGEGKWS TLPNQAGLKR CGKSCRLRWK NYLRPGIKRG NISSDEEELI IRLHNLLGNR WSLIAGRLPG
101: RTDNEIKNHW NSNLRKRLPK TQTKQPKRIK HSTNNENNVC VIRTKAIRCS KTLLFSDLSL QKKSSTSPLP LKEQEMDQGG SSLMGDLEFD FDRIHSEFHF
201: PDLMDFDGLD CGNVTSLVSS NEILGELVPA QGNLDLNRPF TSCHHRGDDE DWLRDFTC
Arabidopsis Description
TT2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT5G35550]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.