Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g02650.t01 | Wine grape | nucleus | 52.0 | 70.91 |
| Solyc05g008250.1.1 | Tomato | nucleus | 54.67 | 69.1 |
| PGSC0003DMT400078477 | Potato | nucleus | 54.22 | 68.54 |
| KRG89277 | Soybean | nucleus | 63.56 | 64.13 |
| VIT_14s0006g01620.t01 | Wine grape | nucleus | 64.44 | 63.6 |
| GSMUA_AchrUn_... | Banana | nucleus | 54.67 | 63.4 |
| KRH50345 | Soybean | nucleus | 64.89 | 63.2 |
| VIT_17s0000g02660.t01 | Wine grape | nucleus | 59.11 | 58.08 |
| GSMUA_Achr10P... | Banana | nucleus | 52.89 | 57.77 |
| GSMUA_Achr6P09620_001 | Banana | nucleus | 47.56 | 53.5 |
| GSMUA_Achr3P21000_001 | Banana | nucleus | 57.33 | 50.79 |
| VIT_03s0038g02310.t01 | Wine grape | nucleus | 50.67 | 45.42 |
| VIT_04s0023g03710.t01 | Wine grape | nucleus | 48.44 | 45.04 |
| VIT_18s0117g00200.t01 | Wine grape | nucleus | 45.78 | 44.21 |
| VIT_18s0117g00210.t01 | Wine grape | nucleus | 45.78 | 39.92 |
| VIT_04s0008g01870.t01 | Wine grape | nucleus | 33.78 | 38.58 |
| VIT_11s0016g01310.t01 | Wine grape | nucleus | 36.89 | 37.73 |
| VIT_09s0002g01380.t01 | Wine grape | nucleus | 33.78 | 37.44 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 47.11 | 36.55 |
| VIT_14s0066g01220.t01 | Wine grape | nucleus | 33.78 | 35.02 |
| VIT_17s0000g08480.t01 | Wine grape | nucleus | 32.89 | 34.26 |
| VIT_01s0127g00730.t01 | Wine grape | nucleus | 33.33 | 34.09 |
| VIT_11s0016g05660.t01 | Wine grape | nucleus | 33.78 | 34.08 |
| VIT_04s0008g01840.t01 | Wine grape | nucleus | 33.78 | 33.63 |
| VIT_11s0016g05690.t01 | Wine grape | nucleus | 32.89 | 33.18 |
| VIT_15s0046g00170.t01 | Wine grape | nucleus | 41.33 | 32.52 |
| VIT_04s0008g01800.t01 | Wine grape | nucleus | 37.33 | 31.7 |
| VIT_13s0084g00530.t01 | Wine grape | nucleus | 36.44 | 31.18 |
| VIT_11s0016g01320.t01 | Wine grape | nucleus | 38.67 | 30.63 |
| VIT_06s0004g00570.t01 | Wine grape | nucleus, plastid | 42.22 | 30.45 |
| VIT_04s0008g01810.t01 | Wine grape | nucleus | 36.89 | 30.07 |
| VIT_08s0007g07230.t01 | Wine grape | nucleus | 42.22 | 29.69 |
| VIT_04s0008g01820.t01 | Wine grape | nucleus | 38.67 | 29.29 |
| VIT_09s0002g01410.t01 | Wine grape | nucleus | 38.22 | 29.05 |
| VIT_04s0008g01830.t01 | Wine grape | nucleus | 36.0 | 28.72 |
| VIT_11s0016g01300.t01 | Wine grape | nucleus | 37.33 | 27.91 |
| VIT_09s0002g01400.t01 | Wine grape | nucleus | 39.56 | 25.95 |
| VIT_05s0077g01360.t01 | Wine grape | nucleus | 43.56 | 25.59 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 40.0 | 24.52 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100233136 | wikigene:100233136 | MapMan:15.5.2.1 | ProteinID:ABW34393 | ProteinID:ABW34393.1 |
| ProteinID:AFX64995 | ProteinID:AFX64995.1 | ProteinID:CBI26917 | ProteinID:CBI26917.3 | UniProt:D7T8U6 | EMBL:EU181425 |
| EMBL:FN595752 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EMBL:JX050227 |
| EntrezGene:MYBC2-L1 | wikigene:MYBC2-L1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF507 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | TIGR:TC52565 | TIGR:TC53713 |
| UniParc:UPI00015C853F | ArrayExpress:VIT_01s0011g04760 | EnsemblPlantsGene:VIT_01s0011g04760 | EnsemblPlants:VIT_01s0011g04760.t01 | unigene:Vvi.7037 | : |
Description
No Description!
Coordinates
chr1:+:4330010..4331639
Molecular Weight (calculated)
25275.8 Da
IEP (calculated)
8.691
GRAVY (calculated)
-0.835
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKPCCDKQD TNKGAWSKQE DQKLIDYIRK NGEGCWRTLP QAAGLLRCGK SCRLRWINYL RPDLKRGNFA EDEEDLIIKL HALLGNRWSL IAGRLPGRTD
101: NEVKNYWNSH LRRKLINMGI DPNNHRLSHN FPRPRDPCTA ATATSSGLNN HASPPVKSVG DNDQTSDAGS CLDDNRRALP DLNLDVAITI PQPSLDTTEE
201: AKKHNESKVS RELEPGPSST LLLFG
101: NEVKNYWNSH LRRKLINMGI DPNNHRLSHN FPRPRDPCTA ATATSSGLNN HASPPVKSVG DNDQTSDAGS CLDDNRRALP DLNLDVAITI PQPSLDTTEE
201: AKKHNESKVS RELEPGPSST LLLFG
001: MGRSPCCEKA HTNKGAWTKE EDERLVAYIK AHGEGCWRSL PKAAGLLRCG KSCRLRWINY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIRRKLINRG IDPTSHRPIQ ESSASQDSKP TQLEPVTSNT INISFTSAPK VETFHESISF PGKSEKISML TFKEEKDECP VQEKFPDLNL
201: ELRISLPDDV DRLQGHGKST TPRCFKCSLG MINGMECRCG RMRCDVVGGS SKGSDMSNGF DFLGLAKKET TSLLGFRSLE MK
101: DNEIKNYWNT HIRRKLINRG IDPTSHRPIQ ESSASQDSKP TQLEPVTSNT INISFTSAPK VETFHESISF PGKSEKISML TFKEEKDECP VQEKFPDLNL
201: ELRISLPDDV DRLQGHGKST TPRCFKCSLG MINGMECRCG RMRCDVVGGS SKGSDMSNGF DFLGLAKKET TSLLGFRSLE MK
Arabidopsis Description
MYB4Transcription repressor MYB4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.