Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_11s0016g05690.t01 | Wine grape | nucleus | 85.65 | 85.65 |
| AT5G52600.1 | Thale cress | nucleus | 52.47 | 58.21 |
| CDY51833 | Canola | nucleus | 51.12 | 57.29 |
| Bra029113.1-P | Field mustard | nucleus | 50.67 | 56.78 |
| CDY56151 | Canola | nucleus | 50.67 | 56.78 |
| CDY65324 | Canola | nucleus | 50.67 | 55.66 |
| Bra022602.1-P | Field mustard | nucleus | 49.33 | 55.56 |
| CDY27055 | Canola | nucleus | 49.33 | 55.56 |
| Solyc07g008010.2.1 | Tomato | nucleus | 47.53 | 50.24 |
| PGSC0003DMT400079416 | Potato | nucleus | 48.43 | 50.23 |
| VIT_17s0000g02650.t01 | Wine grape | nucleus | 31.84 | 43.03 |
| VIT_04s0008g01870.t01 | Wine grape | nucleus | 33.63 | 38.07 |
| VIT_09s0002g01380.t01 | Wine grape | nucleus | 33.63 | 36.95 |
| VIT_14s0066g01220.t01 | Wine grape | nucleus | 35.43 | 36.41 |
| VIT_11s0016g01310.t01 | Wine grape | nucleus | 35.87 | 36.36 |
| VIT_04s0008g01840.t01 | Wine grape | nucleus | 35.87 | 35.4 |
| VIT_17s0000g08480.t01 | Wine grape | nucleus | 33.18 | 34.26 |
| VIT_01s0011g04760.t01 | Wine grape | nucleus | 34.08 | 33.78 |
| GSMUA_Achr3P07950_001 | Banana | nucleus | 35.43 | 33.19 |
| VIT_17s0000g02660.t01 | Wine grape | nucleus | 34.08 | 33.19 |
| VIT_14s0006g01620.t01 | Wine grape | nucleus | 32.74 | 32.02 |
| VIT_04s0023g03710.t01 | Wine grape | nucleus | 34.53 | 31.82 |
| VIT_01s0127g00730.t01 | Wine grape | nucleus | 31.39 | 31.82 |
| VIT_03s0038g02310.t01 | Wine grape | nucleus | 35.43 | 31.47 |
| VIT_04s0008g01800.t01 | Wine grape | nucleus | 37.22 | 31.32 |
| GSMUA_Achr3P27700_001 | Banana | nucleus | 37.67 | 30.66 |
| VIT_04s0008g01810.t01 | Wine grape | nucleus | 37.67 | 30.43 |
| VIT_18s0117g00200.t01 | Wine grape | nucleus | 31.39 | 30.04 |
| VIT_11s0016g01320.t01 | Wine grape | nucleus | 37.67 | 29.58 |
| VIT_13s0084g00530.t01 | Wine grape | nucleus | 33.63 | 28.52 |
| VIT_15s0046g00170.t01 | Wine grape | nucleus | 36.32 | 28.32 |
| VIT_04s0008g01820.t01 | Wine grape | nucleus | 37.67 | 28.28 |
| VIT_04s0008g01830.t01 | Wine grape | nucleus | 34.98 | 27.66 |
| VIT_18s0117g00210.t01 | Wine grape | nucleus | 31.84 | 27.52 |
| VIT_11s0016g01300.t01 | Wine grape | nucleus | 34.53 | 25.58 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 32.74 | 25.17 |
| VIT_08s0007g07230.t01 | Wine grape | nucleus | 35.87 | 25.0 |
| VIT_06s0004g00570.t01 | Wine grape | nucleus, plastid | 34.98 | 25.0 |
| VIT_09s0002g01410.t01 | Wine grape | nucleus | 32.74 | 24.66 |
| VIT_09s0002g01400.t01 | Wine grape | nucleus | 34.98 | 22.74 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 33.18 | 20.16 |
| VIT_05s0077g01360.t01 | Wine grape | nucleus | 32.74 | 19.06 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100244125 | wikigene:100244125 | MapMan:15.5.2.1 | EMBL:AM476211 | ProteinID:CAN81615 |
| ProteinID:CAN81615.1 | ProteinID:CBI28232 | ProteinID:CBI28232.3 | UniProt:D7TC47 | EMBL:FN595756 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | EntrezGene:LOC100244125 | wikigene:LOC100244125 | InterPro:Myb_dom |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF662 | InterPro:SANT/Myb | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI00015C8F3D | ArrayExpress:VIT_11s0016g05660 | EnsemblPlantsGene:VIT_11s0016g05660 | EnsemblPlants:VIT_11s0016g05660.t01 | RefSeq:XP_002282342 |
| RefSeq:XP_002282342.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr11:+:5121267..5122148
Molecular Weight (calculated)
25438.0 Da
IEP (calculated)
9.050
GRAVY (calculated)
-1.040
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETGGLVPK PSVKKGLWKP EEDLLLKKYV EAHGEGKWAT VSERSGLKRG GKSCRLRWKN YLRPNIKRGE ISKEEEDLII RMHKLLGNRW SLIAGRLPGR
101: TDNEVKNYWN THLNKGRSRG KRKSPSSDDD AGNKRHRGLP NSQPVCDGSP EKSSEGSEGR KEEESHNILD NNPRMEDTKS LNHDIKSPLP PSVEDTAFLF
201: YAEPFISFPD PFVLFETLGE MEW
101: TDNEVKNYWN THLNKGRSRG KRKSPSSDDD AGNKRHRGLP NSQPVCDGSP EKSSEGSEGR KEEESHNILD NNPRMEDTKS LNHDIKSPLP PSVEDTAFLF
201: YAEPFISFPD PFVLFETLGE MEW
001: MECKREEGKS YVKRGLWKPE EDMILKSYVE THGEGNWADI SRRSGLKRGG KSCRLRWKNY LRPNIKRGSM SPQEQDLIIR MHKLLGNRWS LIAGRLPGRT
101: DNEVKNYWNT HLNKKPNSRR QNAPESIVGA TPFTDKPVMS TELRRSHGEG GEEESNTWME ETNHFGYDVH VGSPLPLISH YPDNTLVFDP CFSFTDFFPL
201: L
101: DNEVKNYWNT HLNKKPNSRR QNAPESIVGA TPFTDKPVMS TELRRSHGEG GEEESNTWME ETNHFGYDVH VGSPLPLISH YPDNTLVFDP CFSFTDFFPL
201: L
Arabidopsis Description
MYB82Transcription factor MYB82 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTF7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.