Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56151 | Canola | nucleus | 94.97 | 94.97 |
| CDY27055 | Canola | nucleus | 79.9 | 80.3 |
| CDY65324 | Canola | nucleus | 81.41 | 79.8 |
| AT5G52600.1 | Thale cress | nucleus | 79.9 | 79.1 |
| VIT_11s0016g05660.t01 | Wine grape | nucleus | 57.29 | 51.12 |
| PGSC0003DMT400079416 | Potato | nucleus | 53.27 | 49.3 |
| Solyc07g008010.2.1 | Tomato | nucleus | 52.26 | 49.29 |
| VIT_11s0016g05690.t01 | Wine grape | nucleus | 52.76 | 47.09 |
| CDY09882 | Canola | nucleus | 38.69 | 38.89 |
| CDX69561 | Canola | nucleus | 38.19 | 38.58 |
| CDX91023 | Canola | nucleus | 38.19 | 38.38 |
| CDX85583 | Canola | nucleus | 38.19 | 38.38 |
| CDY66972 | Canola | nucleus | 35.18 | 35.0 |
| CDY23616 | Canola | nucleus | 37.19 | 32.46 |
| GSMUA_Achr3P07950_001 | Banana | nucleus | 38.19 | 31.93 |
| CDX86461 | Canola | nucleus | 35.68 | 31.56 |
| CDY07085 | Canola | nucleus | 38.69 | 30.68 |
| CDX91687 | Canola | nucleus | 34.67 | 30.67 |
| CDY24177 | Canola | nucleus | 38.19 | 30.28 |
| CDX90721 | Canola | nucleus | 33.67 | 29.91 |
| CDY05057 | Canola | nucleus | 33.67 | 29.52 |
| CDY59254 | Canola | nucleus | 37.19 | 29.02 |
| CDY49363 | Canola | nucleus | 37.69 | 28.74 |
| CDX84119 | Canola | nucleus | 37.69 | 28.74 |
| CDY44571 | Canola | nucleus | 36.18 | 28.24 |
| CDY40652 | Canola | nucleus | 37.19 | 27.31 |
| CDX72510 | Canola | nucleus | 37.19 | 27.31 |
| GSMUA_Achr3P27700_001 | Banana | nucleus | 36.68 | 26.64 |
| CDX90285 | Canola | nucleus | 37.19 | 26.15 |
| CDX69102 | Canola | nucleus | 37.19 | 25.87 |
| CDX75478 | Canola | nucleus | 37.19 | 25.78 |
| CDY21378 | Canola | nucleus | 34.17 | 25.28 |
| CDY04798 | Canola | nucleus | 34.17 | 25.28 |
| CDY25747 | Canola | nucleus | 33.17 | 25.0 |
| CDX72743 | Canola | nucleus | 36.68 | 24.83 |
| CDY22416 | Canola | nucleus | 36.68 | 24.83 |
| CDY52797 | Canola | nucleus | 32.16 | 24.81 |
| CDY12520 | Canola | nucleus | 33.67 | 24.63 |
| CDY72116 | Canola | nucleus | 35.18 | 24.39 |
| CDY02243 | Canola | nucleus | 35.18 | 24.39 |
| CDY12092 | Canola | nucleus | 37.19 | 24.34 |
| CDY05636 | Canola | nucleus | 31.66 | 21.72 |
| CDY00035 | Canola | nucleus | 31.66 | 19.09 |
| CDX95725 | Canola | nucleus | 32.66 | 18.41 |
| CDX83327 | Canola | nucleus | 32.16 | 18.18 |
| CDX86237 | Canola | nucleus | 31.16 | 18.08 |
| CDX85403 | Canola | nucleus | 30.65 | 17.84 |
| CDY49609 | Canola | nucleus | 31.16 | 17.77 |
| CDY55384 | Canola | nucleus | 24.62 | 16.61 |
| CDX80105 | Canola | nucleus | 24.62 | 14.98 |
| CDY27486 | Canola | plastid | 4.52 | 3.81 |
Protein Annotations
| EnsemblPlants:CDY51833 | EnsemblPlantsGene:GSBRNA2T00004310001 | Gene3D:1.10.10.60 | GO:A0A078IRW1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF662 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDY51833 | ProteinID:CDY51833.1 |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EB1C7B | UniProt:A0A078IRW1 | MapMan:15.5.2.1 | : |
Description
BnaC03g15450DBnaC03g15450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRW1]
Coordinates
chrLK033032:+:66464..67136
Molecular Weight (calculated)
22954.2 Da
IEP (calculated)
7.541
GRAVY (calculated)
-0.895
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MERKEEEMMS HVRRGLWKPE EDMILRNCVE SHGEGNWADI SRRSGLKRGG KSCRLRWKNY LRPNIKRGGM SPQEQDLIIR MHKLLGNRWS LIAGRLPGRT
101: DNEVKNYWNT HLNKKSNSRK QNATESVEAP TDKPVMSTGV RDSHGDQGEG EEGTTNWMEE SNCLAYDDHI GSPLPLISHY TDTFLFDPCF AFMDCFPLL
101: DNEVKNYWNT HLNKKSNSRK QNATESVEAP TDKPVMSTGV RDSHGDQGEG EEGTTNWMEE SNCLAYDDHI GSPLPLISHY TDTFLFDPCF AFMDCFPLL
001: MECKREEGKS YVKRGLWKPE EDMILKSYVE THGEGNWADI SRRSGLKRGG KSCRLRWKNY LRPNIKRGSM SPQEQDLIIR MHKLLGNRWS LIAGRLPGRT
101: DNEVKNYWNT HLNKKPNSRR QNAPESIVGA TPFTDKPVMS TELRRSHGEG GEEESNTWME ETNHFGYDVH VGSPLPLISH YPDNTLVFDP CFSFTDFFPL
201: L
101: DNEVKNYWNT HLNKKPNSRR QNAPESIVGA TPFTDKPVMS TELRRSHGEG GEEESNTWME ETNHFGYDVH VGSPLPLISH YPDNTLVFDP CFSFTDFFPL
201: L
Arabidopsis Description
MYB82Transcription factor MYB82 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTF7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.