Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033572.1-P | Field mustard | nucleus | 98.98 | 98.98 |
| CDY22416 | Canola | nucleus | 98.98 | 98.98 |
| CDX90285 | Canola | nucleus | 82.65 | 85.87 |
| CDY52797 | Canola | nucleus | 72.11 | 82.17 |
| CDY12092 | Canola | nucleus | 82.99 | 80.26 |
| GSMUA_Achr11P... | Banana | nucleus | 42.86 | 75.45 |
| GSMUA_Achr9P24180_001 | Banana | nucleus | 43.88 | 74.57 |
| Zm00001d022628_P001 | Maize | nucleus | 53.4 | 72.02 |
| GSMUA_Achr8P33900_001 | Banana | nucleus | 49.66 | 71.92 |
| KRH60702 | Soybean | nucleus | 51.36 | 71.9 |
| GSMUA_Achr1P02420_001 | Banana | nucleus | 46.94 | 70.77 |
| VIT_04s0023g03710.t01 | Wine grape | nucleus | 55.1 | 66.94 |
| KRH29280 | Soybean | nucleus | 55.1 | 65.85 |
| KRH51400 | Soybean | nucleus | 52.04 | 65.11 |
| Os09t0538400-01 | Rice | extracellular | 54.76 | 64.14 |
| Solyc01g111500.2.1 | Tomato | nucleus | 54.76 | 63.89 |
| KRH24301 | Soybean | nucleus | 54.76 | 63.64 |
| PGSC0003DMT400015803 | Potato | nucleus | 54.42 | 62.99 |
| GSMUA_Achr1P07550_001 | Banana | nucleus | 50.68 | 62.87 |
| TraesCS7B01G169900.1 | Wheat | nucleus | 49.66 | 62.13 |
| TraesCS7D01G272400.1 | Wheat | nucleus | 49.32 | 61.97 |
| EER99264 | Sorghum | nucleus | 54.76 | 60.98 |
| HORVU7Hr1G057410.1 | Barley | nucleus | 49.32 | 60.92 |
| PGSC0003DMT400034372 | Potato | nucleus | 55.44 | 60.82 |
| GSMUA_Achr1P26520_001 | Banana | nucleus | 49.66 | 60.58 |
| Solyc10g055410.1.1 | Tomato | nucleus | 56.12 | 60.44 |
| TraesCS7A01G272100.1 | Wheat | nucleus | 48.98 | 60.0 |
| TraesCS5B01G330100.1 | Wheat | nucleus | 52.04 | 58.17 |
| TraesCS5D01G335700.1 | Wheat | nucleus | 52.38 | 57.89 |
| EES14116 | Sorghum | nucleus | 50.68 | 57.75 |
| TraesCS5A01G329900.1 | Wheat | nucleus | 52.38 | 57.46 |
| CDY40652 | Canola | nucleus | 52.72 | 57.2 |
| CDX72510 | Canola | nucleus | 52.72 | 57.2 |
| Zm00001d006236_P002 | Maize | nucleus | 53.06 | 57.14 |
| Zm00001d032024_P001 | Maize | nucleus | 49.32 | 57.09 |
| HORVU5Hr1G083910.2 | Barley | nucleus | 52.04 | 56.88 |
| GSMUA_Achr4P25710_001 | Banana | nucleus | 36.39 | 55.73 |
| CDX91687 | Canola | nucleus | 42.52 | 55.56 |
| CDX75478 | Canola | nucleus | 54.08 | 55.4 |
| Zm00001d053220_P001 | Maize | nucleus | 48.98 | 55.38 |
| CDX90721 | Canola | nucleus | 41.84 | 54.91 |
| CDX69102 | Canola | nucleus | 53.4 | 54.9 |
| CDY02243 | Canola | nucleus | 53.06 | 54.36 |
| CDY05057 | Canola | nucleus | 41.84 | 54.19 |
| CDY72116 | Canola | nucleus | 52.72 | 54.01 |
| CDY04798 | Canola | nucleus | 46.26 | 50.56 |
| CDY21378 | Canola | nucleus | 45.92 | 50.19 |
| CDY25747 | Canola | nucleus | 44.22 | 49.24 |
| CDY12520 | Canola | nucleus | 44.22 | 47.79 |
| CDX69561 | Canola | nucleus | 26.87 | 40.1 |
| CDY27055 | Canola | nucleus | 26.87 | 39.9 |
| CDY09882 | Canola | nucleus | 26.53 | 39.39 |
| CDY65324 | Canola | nucleus | 26.87 | 38.92 |
| CDX85583 | Canola | nucleus | 26.19 | 38.89 |
| CDX91023 | Canola | nucleus | 26.19 | 38.89 |
| CDY23616 | Canola | nucleus | 29.25 | 37.72 |
| CDY07085 | Canola | nucleus | 31.97 | 37.45 |
| CDY24177 | Canola | nucleus | 31.63 | 37.05 |
| CDY56151 | Canola | nucleus | 24.83 | 36.68 |
| CDY51833 | Canola | nucleus | 24.83 | 36.68 |
| CDY59254 | Canola | nucleus | 30.95 | 35.69 |
| CDY66972 | Canola | nucleus | 23.13 | 34.0 |
| CDY49363 | Canola | nucleus | 29.59 | 33.33 |
| CDX84119 | Canola | nucleus | 29.59 | 33.33 |
| CDX86461 | Canola | nucleus | 24.49 | 32.0 |
| CDY05636 | Canola | nucleus | 29.59 | 30.0 |
| CDY44571 | Canola | nucleus | 25.17 | 29.02 |
| CDX83327 | Canola | nucleus | 33.67 | 28.12 |
| CDY00035 | Canola | nucleus | 30.95 | 27.58 |
| CDX95725 | Canola | nucleus | 32.99 | 27.48 |
| CDY49609 | Canola | nucleus | 31.29 | 26.36 |
| CDX85403 | Canola | nucleus | 30.61 | 26.32 |
| CDX86237 | Canola | nucleus | 30.61 | 26.24 |
| CDY55384 | Canola | nucleus | 23.47 | 23.39 |
| CDX80105 | Canola | nucleus | 23.81 | 21.41 |
| CDY27486 | Canola | plastid | 5.44 | 6.78 |
Protein Annotations
| EnsemblPlants:CDX72743 | EnsemblPlantsGene:GSBRNA2T00100343001 | Gene3D:1.10.10.60 | GO:A0A078CCM1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF741 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX72743 | ProteinID:CDX72743.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EE82C1 | MapMan:15.5.2.1 | : |
Description
BnaC07g47650D
Coordinates
chrLK031796:-:2915088..2916467
Molecular Weight (calculated)
33072.5 Da
IEP (calculated)
8.555
GRAVY (calculated)
-0.661
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKA HTNKGAWTKE EDERLIAYIK AHGEGCWRSL PKAAGLLRCG KSCRLRWINY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIRRKLINRG IDPTTHRPIQ ESSASQDSKP THLEAITSNT INISFASSSS TPKMEIFQES TSFPGKQEKI SMVTFKEEKD ECPVEENFPD
201: LNLELRISLP DVVDHRHQGL VGEGKTTTPR RCFKCSLGTI NGMECRCGRM RCDVVGGSNG SGKGSDMSNG FDFLGLAKKE TNTCLFGFRS LEMK
101: DNEIKNYWNT HIRRKLINRG IDPTTHRPIQ ESSASQDSKP THLEAITSNT INISFASSSS TPKMEIFQES TSFPGKQEKI SMVTFKEEKD ECPVEENFPD
201: LNLELRISLP DVVDHRHQGL VGEGKTTTPR RCFKCSLGTI NGMECRCGRM RCDVVGGSNG SGKGSDMSNG FDFLGLAKKE TNTCLFGFRS LEMK
001: MGRSPCCEKA HTNKGAWTKE EDERLVAYIK AHGEGCWRSL PKAAGLLRCG KSCRLRWINY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIRRKLINRG IDPTSHRPIQ ESSASQDSKP TQLEPVTSNT INISFTSAPK VETFHESISF PGKSEKISML TFKEEKDECP VQEKFPDLNL
201: ELRISLPDDV DRLQGHGKST TPRCFKCSLG MINGMECRCG RMRCDVVGGS SKGSDMSNGF DFLGLAKKET TSLLGFRSLE MK
101: DNEIKNYWNT HIRRKLINRG IDPTSHRPIQ ESSASQDSKP TQLEPVTSNT INISFTSAPK VETFHESISF PGKSEKISML TFKEEKDECP VQEKFPDLNL
201: ELRISLPDDV DRLQGHGKST TPRCFKCSLG MINGMECRCG RMRCDVVGGS SKGSDMSNGF DFLGLAKKET TSLLGFRSLE MK
Arabidopsis Description
MYB4Transcription repressor MYB4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZP1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.