Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017685.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX72510 | Canola | nucleus | 97.79 | 97.79 |
| CDX75478 | Canola | nucleus | 84.13 | 79.44 |
| CDX69102 | Canola | nucleus | 83.03 | 78.67 |
| AT4G34990.1 | Thale cress | nucleus | 78.6 | 77.74 |
| CDY02243 | Canola | nucleus | 65.31 | 61.67 |
| CDY72116 | Canola | nucleus | 64.94 | 61.32 |
| CDX90285 | Canola | nucleus | 57.56 | 55.12 |
| CDX90721 | Canola | nucleus | 43.91 | 53.12 |
| CDX91687 | Canola | nucleus | 43.91 | 52.89 |
| CDX72743 | Canola | nucleus | 57.2 | 52.72 |
| CDY22416 | Canola | nucleus | 57.2 | 52.72 |
| CDY05057 | Canola | nucleus | 43.54 | 51.98 |
| CDY12092 | Canola | nucleus | 57.2 | 50.99 |
| CDY52797 | Canola | nucleus | 48.34 | 50.78 |
| CDY25747 | Canola | nucleus | 47.23 | 48.48 |
| CDY21378 | Canola | nucleus | 47.23 | 47.58 |
| CDY04798 | Canola | nucleus | 47.23 | 47.58 |
| CDY12520 | Canola | nucleus | 46.86 | 46.69 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 49.08 | 45.86 |
| KRH54016 | Soybean | nucleus | 48.34 | 43.52 |
| KRH63931 | Soybean | nucleus | 47.97 | 43.05 |
| CDY27055 | Canola | nucleus | 28.78 | 39.39 |
| CDY65324 | Canola | nucleus | 29.15 | 38.92 |
| CDX69561 | Canola | nucleus | 27.68 | 38.07 |
| CDY09882 | Canola | nucleus | 27.31 | 37.37 |
| CDY56151 | Canola | nucleus | 27.31 | 37.19 |
| CDY51833 | Canola | nucleus | 27.31 | 37.19 |
| CDX85583 | Canola | nucleus | 26.94 | 36.87 |
| CDX91023 | Canola | nucleus | 26.94 | 36.87 |
| CDY23616 | Canola | nucleus | 31.0 | 36.84 |
| CDY07085 | Canola | nucleus | 33.58 | 36.26 |
| CDY24177 | Canola | nucleus | 33.21 | 35.86 |
| CDY59254 | Canola | nucleus | 32.47 | 34.51 |
| CDX84119 | Canola | nucleus | 32.1 | 33.33 |
| CDY49363 | Canola | nucleus | 32.1 | 33.33 |
| CDY66972 | Canola | nucleus | 24.35 | 33.0 |
| CDX86461 | Canola | nucleus | 25.46 | 30.67 |
| CDY05636 | Canola | nucleus | 31.73 | 29.66 |
| CDX83327 | Canola | nucleus | 37.27 | 28.69 |
| CDX95725 | Canola | nucleus | 36.9 | 28.33 |
| CDY00035 | Canola | nucleus | 34.32 | 28.18 |
| CDY44571 | Canola | nucleus | 25.46 | 27.06 |
| CDY49609 | Canola | nucleus | 34.69 | 26.93 |
| CDX86237 | Canola | nucleus | 33.21 | 26.24 |
| CDX85403 | Canola | nucleus | 32.84 | 26.02 |
| CDY55384 | Canola | nucleus | 28.04 | 25.76 |
| CDX80105 | Canola | nucleus | 28.41 | 23.55 |
| CDY27486 | Canola | plastid | 7.01 | 8.05 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078HS44 | UniProt:A0A078HS44 | EnsemblPlants:CDY40652 | ProteinID:CDY40652 |
| ProteinID:CDY40652.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00071520001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF741 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002541293 | SEG:seg |
Description
BnaA03g53110DBnaA03g53110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HS44]
Coordinates
chrLK032476:+:266660..267624
Molecular Weight (calculated)
30854.5 Da
IEP (calculated)
8.612
GRAVY (calculated)
-0.744
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKD HTNKGAWTKE EDQKLISYIK SHGEGCWRSL PASAGLLRCG KSCRLRWINY LRPDLKRGNF TLEEDDLIIK LHSLLGNKWS LIATRLPGRT
101: DNEIKNYWNT HVKRKLLRGG IDPATHRPIK ARRDASEARE TEDSLVKVLS FGPQLEKEES SREEGRFKKS LTCKTKSLDL NLELRISPPW QDQQQRDERK
201: LLFGREKYLC SACRFGLGNG KECSCENVRC HIDDSSSSSY SSSDISSSVV GFDFLGLNTS SVLDYTSLEM N
101: DNEIKNYWNT HVKRKLLRGG IDPATHRPIK ARRDASEARE TEDSLVKVLS FGPQLEKEES SREEGRFKKS LTCKTKSLDL NLELRISPPW QDQQQRDERK
201: LLFGREKYLC SACRFGLGNG KECSCENVRC HIDDSSSSSY SSSDISSSVV GFDFLGLNTS SVLDYTSLEM N
001: MGRSPCCEKD HTNKGAWTKE EDDKLISYIK AHGEGCWRSL PRSAGLQRCG KSCRLRWINY LRPDLKRGNF TLEEDDLIIK LHSLLGNKWS LIATRLPGRT
101: DNEIKNYWNT HVKRKLLRKG IDPATHRPIN ETKTSQDSSD SSKTEDPLVK ILSFGPQLEK IANFGDERIQ KRVEYSVVEE RCLDLNLELR ISPPWQDKLH
201: DERNLRFGRV KYRCSACRFG FGNGKECSCN NVKCQTEDSS SSSYSSTDIS SSIGYDFLGL NNTRVLDFST LEMK
101: DNEIKNYWNT HVKRKLLRKG IDPATHRPIN ETKTSQDSSD SSKTEDPLVK ILSFGPQLEK IANFGDERIQ KRVEYSVVEE RCLDLNLELR ISPPWQDKLH
201: DERNLRFGRV KYRCSACRFG FGNGKECSCN NVKCQTEDSS SSSYSSTDIS SSIGYDFLGL NNTRVLDFST LEMK
Arabidopsis Description
MYB32Transcription factor MYB32 [Source:UniProtKB/Swiss-Prot;Acc:O49608]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.