Factsheet for Bra017685.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40652	Canola	nucleus	100.0	100.0
CDX72510	Canola	nucleus	97.79	97.79
Bra011576.1-P	Field mustard	nucleus	83.76	79.09
AT4G34990.1	Thale cress	nucleus	78.6	77.74
Bra013055.1-P	Field mustard	nucleus	65.31	61.46
Bra010736.1-P	Field mustard	nucleus	57.2	54.77
Bra000680.1-P	Field mustard	nucleus	43.91	53.12
Bra033572.1-P	Field mustard	nucleus	57.2	52.72
Bra024526.1-P	Field mustard	nucleus	47.23	47.58
Bra012337.1-P	Field mustard	nucleus	47.23	46.38
VIT_07s0130g00040.t01	Wine grape	nucleus	49.08	45.86
KRH54016	Soybean	nucleus	48.34	43.52
KRH63931	Soybean	nucleus	47.97	43.05
Bra022602.1-P	Field mustard	nucleus	28.78	39.39
Bra008740.1-P	Field mustard	nucleus	27.68	38.07
Bra023486.1-P	Field mustard	nucleus	26.2	37.77
Bra029113.1-P	Field mustard	nucleus	27.31	37.19
Bra039395.1-P	Field mustard	nucleus	33.21	35.86
Bra027423.1-P	Field mustard	nucleus	32.47	34.51
Bra035532.1-P	Field mustard	nucleus	32.1	33.46
Bra025311.1-P	Field mustard	nucleus	25.46	30.67
Bra039065.1-P	Field mustard	nucleus	21.77	29.65
Bra025589.1-P	Field mustard	nucleus	25.46	27.06
Bra000453.1-P	Field mustard	nucleus	37.27	26.86
Bra036145.1-P	Field mustard	nucleus	34.32	26.8
Bra037419.1-P	Field mustard	nucleus	33.21	26.24
Bra004456.1-P	Field mustard	nucleus	28.41	21.1

Protein Annotations

EnsemblPlants:Bra017685.1	EnsemblPlants:Bra017685.1-P	EnsemblPlantsGene:Bra017685	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF741	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002541293	UniProt:M4DMF2	MapMan:15.5.2.1	:	:

Description

AT4G34990 (E=5e-113) AtMYB32 | AtMYB32 (myb domain protein 32); DNA binding / transcription factor

Coordinates

chrA03:-:29761608..29762489

Molecular Weight (calculated)

30854.5 Da

IEP (calculated)

8.612

GRAVY (calculated)

-0.744

Length

271 amino acids

Sequence
(BLAST)

001: MGRSPCCEKD HTNKGAWTKE EDQKLISYIK SHGEGCWRSL PASAGLLRCG KSCRLRWINY LRPDLKRGNF TLEEDDLIIK LHSLLGNKWS LIATRLPGRT
101: DNEIKNYWNT HVKRKLLRGG IDPATHRPIK ARRDASEARE TEDSLVKVLS FGPQLEKEES SREEGRFKKS LTCKTKSLDL NLELRISPPW QDQQQRDERK
201: LLFGREKYLC SACRFGLGNG KECSCENVRC HIDDSSSSSY SSSDISSSVV GFDFLGLNTS SVLDYTSLEM N

Best Arabidopsis Sequence Match ( AT4G34990.1 )
(BLAST)

001: MGRSPCCEKD HTNKGAWTKE EDDKLISYIK AHGEGCWRSL PRSAGLQRCG KSCRLRWINY LRPDLKRGNF TLEEDDLIIK LHSLLGNKWS LIATRLPGRT
101: DNEIKNYWNT HVKRKLLRKG IDPATHRPIN ETKTSQDSSD SSKTEDPLVK ILSFGPQLEK IANFGDERIQ KRVEYSVVEE RCLDLNLELR ISPPWQDKLH
201: DERNLRFGRV KYRCSACRFG FGNGKECSCN NVKCQTEDSS SSSYSSTDIS SSIGYDFLGL NNTRVLDFST LEMK

Arabidopsis Description

MYB32Transcription factor MYB32 [Source:UniProtKB/Swiss-Prot;Acc:O49608]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.