Factsheet for Bra029113.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56151	Canola	nucleus	100.0	100.0
Bra022602.1-P	Field mustard	nucleus	81.91	82.32
AT5G52600.1	Thale cress	nucleus	81.41	80.6
VIT_11s0016g05660.t01	Wine grape	nucleus	56.78	50.67
PGSC0003DMT400079416	Potato	nucleus	51.76	47.91
Solyc07g008010.2.1	Tomato	nucleus	50.75	47.87
VIT_11s0016g05690.t01	Wine grape	nucleus	52.26	46.64
Bra023486.1-P	Field mustard	nucleus	36.68	38.83
Bra008740.1-P	Field mustard	nucleus	38.19	38.58
Bra025311.1-P	Field mustard	nucleus	36.18	32.0
Bra039065.1-P	Field mustard	nucleus	31.66	31.66
GSMUA_Achr3P07950_001	Banana	nucleus	37.69	31.51
Bra039395.1-P	Field mustard	nucleus	37.19	29.48
Bra000680.1-P	Field mustard	nucleus	33.17	29.46
Bra035532.1-P	Field mustard	nucleus	38.19	29.23
Bra025589.1-P	Field mustard	nucleus	36.68	28.63
Bra027423.1-P	Field mustard	nucleus	36.18	28.24
Bra017685.1-P	Field mustard	nucleus	37.19	27.31
GSMUA_Achr3P27700_001	Banana	nucleus	37.19	27.01
Bra010736.1-P	Field mustard	nucleus	37.19	26.15
Bra011576.1-P	Field mustard	nucleus	37.19	25.78
Bra024526.1-P	Field mustard	nucleus	34.17	25.28
Bra033572.1-P	Field mustard	nucleus	36.68	24.83
Bra013055.1-P	Field mustard	nucleus	35.68	24.65
Bra012337.1-P	Field mustard	nucleus	34.17	24.64
Bra037419.1-P	Field mustard	nucleus	31.66	18.37
Bra036145.1-P	Field mustard	nucleus	31.66	18.16
Bra000453.1-P	Field mustard	nucleus	32.16	17.02
Bra004456.1-P	Field mustard	nucleus	25.63	13.97

Protein Annotations

EnsemblPlants:Bra029113.1	EnsemblPlants:Bra029113.1-P	EnsemblPlantsGene:Bra029113	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF662	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI0002540066	UniProt:M4EJZ6	MapMan:15.5.2.1	:	:

Description

AT5G52600 (E=3e-086) AtMYB82 | AtMYB82 (myb domain protein 82); DNA binding / transcription factor

Coordinates

chrA03:+:6417093..6417768

Molecular Weight (calculated)

22941.2 Da

IEP (calculated)

8.492

GRAVY (calculated)

-0.926

Length

199 amino acids

Sequence
(BLAST)

001: MEKKEEERKS HVRRGLWKPE EDMILRNCVE SHGEGNWADI SRRSGLKRGG KSCRLRWKNY LRPNIKRGGM SPQEQDLIIR MHKLLGNRWS LIAGRLPGRT
101: DNEVKNYWNT HLNKKSTSRK QNATESVEAP TDKTVMSTGV RHSHGEQGEG EEGTTNWMEE TNCLAYDDHI GSPLPLISHY TDTLVFDPCF AFMDCFPLL

Best Arabidopsis Sequence Match ( AT5G52600.1 )
(BLAST)

001: MECKREEGKS YVKRGLWKPE EDMILKSYVE THGEGNWADI SRRSGLKRGG KSCRLRWKNY LRPNIKRGSM SPQEQDLIIR MHKLLGNRWS LIAGRLPGRT
101: DNEVKNYWNT HLNKKPNSRR QNAPESIVGA TPFTDKPVMS TELRRSHGEG GEEESNTWME ETNHFGYDVH VGSPLPLISH YPDNTLVFDP CFSFTDFFPL
201: L

Arabidopsis Description

MYB82Transcription factor MYB82 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTF7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.