Factsheet for Bra008740.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra004539.1-P
Bra027653.1-P
Bra027796.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14750.1	Bra027653.1-P	AT1G63650.1	14627722
AT5G14750.1	Bra027796.1-P	AT1G63650.1	14627722
AT5G14750.1	Bra027653.1-P	AT1G63650.1	15361138
AT5G14750.1	Bra027796.1-P	AT1G63650.1	15361138
AT5G14750.1	Bra027653.1-P	AT1G63650.1	17644729
AT5G14750.1	Bra027796.1-P	AT1G63650.1	17644729
AT5G14750.1	Bra004539.1-P	AT2G46410.1	17644729

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69561	Canola	nucleus	100.0	100.0
CDY09882	Canola	nucleus	97.46	96.97
Bra023486.1-P	Field mustard	nucleus	87.31	91.49
AT5G14750.1	Thale cress	nucleus	92.89	90.15
VIT_14s0066g01220.t01	Wine grape	nucleus	59.9	54.38
Bra025589.1-P	Field mustard	nucleus	64.47	49.8
Bra025311.1-P	Field mustard	nucleus	56.85	49.78
Bra039065.1-P	Field mustard	nucleus	49.75	49.25
Bra022602.1-P	Field mustard	nucleus	39.59	39.39
Bra029113.1-P	Field mustard	nucleus	38.58	38.19
GSMUA_Achr3P07950_001	Banana	nucleus	40.1	33.19
Bra039395.1-P	Field mustard	nucleus	41.62	32.67
Bra000680.1-P	Field mustard	nucleus	37.06	32.59
Bra027423.1-P	Field mustard	nucleus	42.13	32.55
Bra024526.1-P	Field mustard	nucleus	39.59	29.0
Bra035532.1-P	Field mustard	nucleus	37.56	28.46
GSMUA_Achr3P27700_001	Banana	nucleus	39.09	28.1
Bra017685.1-P	Field mustard	nucleus	38.07	27.68
Bra010736.1-P	Field mustard	nucleus	39.59	27.56
Bra012337.1-P	Field mustard	nucleus	38.58	27.54
Bra033572.1-P	Field mustard	nucleus	40.1	26.87
Bra011576.1-P	Field mustard	nucleus	38.58	26.48
Bra013055.1-P	Field mustard	nucleus	36.04	24.65
Bra037419.1-P	Field mustard	nucleus	37.06	21.28
Bra036145.1-P	Field mustard	nucleus	37.06	21.04
Bra000453.1-P	Field mustard	nucleus	35.03	18.35
Bra004456.1-P	Field mustard	nucleus	27.92	15.07

Protein Annotations

EnsemblPlants:Bra008740.1	EnsemblPlants:Bra008740.1-P	EnsemblPlantsGene:Bra008740	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb
PANTHER:PTHR10641	PANTHER:PTHR10641:SF625	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717
SUPFAM:SSF46689	UniParc:UPI00025451A1	UniProt:M4CWZ3	MapMan:15.5.2.1	:	:

Description

AT5G14750 (E=3e-094) WER, ATMYB66, WER1 | ATMYB66 (MYB DOMAIN PROTEIN 66); DNA binding / protein binding / transcription factor/ transcription regulator

Coordinates

chrA10:+:13647549..13648860

Molecular Weight (calculated)

22967.3 Da

IEP (calculated)

9.327

GRAVY (calculated)

-0.938

Length

197 amino acids

Sequence
(BLAST)

001: MRKKVSSGEE GNNEYKKGLW TVEEDKILMD YVKAHGKGHW NRIAKKTGLK RCGKSCRLRW MNYLSPNVKR GNFTDQEEDL IIRLHKLLGN RWSLIAKRVP
101: GRTDNQVKNY WNTHLSKKLG IKDPKNKPSN GDIVYQINLT NPTETLEETK ISNINDNDEI QEDRHGSNYL SSLWVHDDTF ELSTLTNMME FLDGHCF

Best Arabidopsis Sequence Match ( AT5G14750.1 )
(BLAST)

001: MRKKVSSSGD EGNNEYKKGL WTVEEDKILM DYVKAHGKGH WNRIAKKTGL KRCGKSCRLR WMNYLSPNVK RGNFTEQEED LIIRLHKLLG NRWSLIAKRV
101: PGRTDNQVKN YWNTHLSKKL GIKDQKTKQS NGDIVYQINL PNPTETSEET KISNIVDNNN ILGDEIQEDH QGSNYLSSLW VHEDEFELST LTNMMDFIDG
201: HCF

Arabidopsis Description

WERWER1 [Source:UniProtKB/TrEMBL;Acc:A0A178UJM1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.