Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69561 | Canola | nucleus | 90.15 | 92.89 |
| Bra008740.1-P | Field mustard | nucleus | 90.15 | 92.89 |
| CDY09882 | Canola | nucleus | 89.66 | 91.92 |
| CDX91023 | Canola | nucleus | 89.66 | 91.92 |
| CDX85583 | Canola | nucleus | 89.16 | 91.41 |
| Bra023486.1-P | Field mustard | nucleus | 84.24 | 90.96 |
| AT5G40330.1 | Thale cress | nucleus | 62.07 | 57.53 |
| AT3G27920.1 | Thale cress | nucleus | 60.1 | 53.51 |
| VIT_14s0066g01220.t01 | Wine grape | nucleus | 56.65 | 53.0 |
| AT5G52600.1 | Thale cress | nucleus | 37.44 | 37.81 |
| AT1G35515.1 | Thale cress | nucleus | 35.47 | 33.96 |
| AT3G13540.1 | Thale cress | nucleus | 40.89 | 33.33 |
| GSMUA_Achr3P07950_001 | Banana | nucleus | 38.42 | 32.77 |
| AT4G09460.1 | Thale cress | nucleus | 36.45 | 31.36 |
| AT1G22640.1 | Thale cress | nucleus | 38.42 | 30.35 |
| GSMUA_Achr3P27700_001 | Banana | nucleus | 37.93 | 28.1 |
| AT2G16720.1 | Thale cress | nucleus | 36.45 | 27.51 |
| AT4G34990.1 | Thale cress | nucleus | 36.95 | 27.37 |
| AT4G38620.1 | Thale cress | nucleus | 37.93 | 27.3 |
| AT5G35550.2 | Thale cress | nucleus | 31.03 | 24.14 |
| AT5G49330.1 | Thale cress | nucleus | 35.96 | 21.34 |
| AT3G62610.1 | Thale cress | nucleus | 33.5 | 19.83 |
| AT2G47460.1 | Thale cress | nucleus | 35.47 | 19.41 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:831327 | UniProt:A0A178UJM1 | ProteinID:AAF18939.1 | EMBL:AB493749 |
| ProteinID:AED92073.1 | EMBL:AF062900 | ArrayExpress:AT5G14750 | EnsemblPlantsGene:AT5G14750 | RefSeq:AT5G14750 | TAIR:AT5G14750 |
| RefSeq:AT5G14750-TAIR-G | EnsemblPlants:AT5G14750.1 | TAIR:AT5G14750.1 | EMBL:AY519623 | EMBL:BT026346 | UniProt:C0SVP6 |
| ProteinID:CAC01874.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009987 | GO:GO:0030154 |
| GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045165 | GO:GO:0045893 | GO:GO:0048765 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | InterPro:Myb_dom | RefSeq:NP_196979.1 | ProteinID:OAO93467.1 | PFAM:PF00249 | PO:PO:0000026 |
| PO:PO:0000061 | PO:PO:0000084 | PO:PO:0000263 | PO:PO:0003018 | PO:PO:0003021 | PO:PO:0006036 |
| PO:PO:0009005 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF625 | UniProt:Q9SEI0 | InterPro:SANT/Myb |
| SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000A4586 | Symbol:WER | : | : |
Description
WERWER1 [Source:UniProtKB/TrEMBL;Acc:A0A178UJM1]
Coordinates
chr5:-:4763372..4764823
Molecular Weight (calculated)
23569.9 Da
IEP (calculated)
8.778
GRAVY (calculated)
-0.909
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKKVSSSGD EGNNEYKKGL WTVEEDKILM DYVKAHGKGH WNRIAKKTGL KRCGKSCRLR WMNYLSPNVK RGNFTEQEED LIIRLHKLLG NRWSLIAKRV
101: PGRTDNQVKN YWNTHLSKKL GIKDQKTKQS NGDIVYQINL PNPTETSEET KISNIVDNNN ILGDEIQEDH QGSNYLSSLW VHEDEFELST LTNMMDFIDG
201: HCF
101: PGRTDNQVKN YWNTHLSKKL GIKDQKTKQS NGDIVYQINL PNPTETSEET KISNIVDNNN ILGDEIQEDH QGSNYLSSLW VHEDEFELST LTNMMDFIDG
201: HCF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.