Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04798 | Canola | nucleus | 81.71 | 78.07 |
| CDY21378 | Canola | nucleus | 81.32 | 77.7 |
| Bra024526.1-P | Field mustard | nucleus | 81.32 | 77.7 |
| CDY25747 | Canola | nucleus | 79.38 | 77.27 |
| CDY12520 | Canola | nucleus | 81.32 | 76.84 |
| Bra012337.1-P | Field mustard | nucleus | 82.49 | 76.81 |
| CDX91687 | Canola | nucleus | 66.93 | 76.44 |
| AT1G35515.1 | Thale cress | nucleus | 46.69 | 56.6 |
| AT4G09460.1 | Thale cress | nucleus | 50.97 | 55.51 |
| AT2G16720.1 | Thale cress | nucleus | 51.75 | 49.44 |
| AT4G34990.1 | Thale cress | nucleus | 51.36 | 48.18 |
| AT4G38620.1 | Thale cress | nucleus | 52.53 | 47.87 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 52.14 | 46.21 |
| KRH54016 | Soybean | nucleus | 53.31 | 45.51 |
| KRH63931 | Soybean | nucleus | 52.53 | 44.7 |
| AT5G14750.1 | Thale cress | nucleus | 30.35 | 38.42 |
| AT3G13540.1 | Thale cress | nucleus | 35.02 | 36.14 |
| AT5G40330.1 | Thale cress | nucleus | 29.57 | 34.7 |
| AT5G52600.1 | Thale cress | nucleus | 26.85 | 34.33 |
| AT3G27920.1 | Thale cress | nucleus | 29.18 | 32.89 |
| AT5G35550.2 | Thale cress | nucleus | 30.35 | 29.89 |
| AT5G49330.1 | Thale cress | nucleus | 36.19 | 27.19 |
| AT3G62610.1 | Thale cress | nucleus | 33.85 | 25.36 |
| AT2G47460.1 | Thale cress | nucleus | 35.02 | 24.26 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:838870 | UniProt:A0A178WFN1 | ProteinID:AAC25522.1 | ProteinID:AAF18515.1 |
| ProteinID:AEE30263.1 | EMBL:AF062859 | ArrayExpress:AT1G22640 | EnsemblPlantsGene:AT1G22640 | RefSeq:AT1G22640 | TAIR:AT1G22640 |
| RefSeq:AT1G22640-TAIR-G | EnsemblPlants:AT1G22640.1 | TAIR:AT1G22640.1 | Symbol:ATMYB3 | EMBL:AY072543 | EMBL:AY519557 |
| EMBL:BT000841 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009611 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009751 | GO:GO:0009800 | GO:GO:0009892 | GO:GO:0009987 |
| GO:GO:0019748 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb_dom | RefSeq:NP_564176.2 | ProteinID:OAP16571.1 | PFAM:PF00249 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF949 | UniProt:Q9S9K9 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI00000ABF81 | : | : | : | : | : |
Description
MYB3MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1]
Coordinates
chr1:+:8006064..8007460
Molecular Weight (calculated)
29353.7 Da
IEP (calculated)
7.661
GRAVY (calculated)
-0.702
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKA HMNKGAWTKE EDQLLVDYIR KHGEGCWRSL PRAAGLQRCG KSCRLRWMNY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.