Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035532.1-P | Field mustard | nucleus | 63.98 | 64.23 |
| CDY49363 | Canola | nucleus | 63.98 | 63.98 |
| CDX84119 | Canola | nucleus | 63.98 | 63.98 |
| VIT_11s0016g01310.t01 | Wine grape | nucleus | 32.18 | 38.18 |
| TraesCS3B01G515900.1 | Wheat | nucleus | 29.12 | 37.25 |
| TraesCS4D01G319800.1 | Wheat | nucleus | 29.5 | 34.38 |
| AT1G35515.1 | Thale cress | nucleus | 27.59 | 33.96 |
| AT5G52600.1 | Thale cress | nucleus | 25.67 | 33.33 |
| HORVU3Hr1G100500.1 | Barley | nucleus | 31.8 | 32.55 |
| GSMUA_Achr9P27380_001 | Banana | nucleus | 32.18 | 32.31 |
| GSMUA_Achr10P... | Banana | nucleus | 34.1 | 32.01 |
| TraesCS4D01G319700.1 | Wheat | nucleus | 29.5 | 31.69 |
| TraesCS5A01G495500.1 | Wheat | nucleus | 29.12 | 31.41 |
| AT5G14750.1 | Thale cress | nucleus | 24.14 | 31.03 |
| TraesCS4B01G323300.1 | Wheat | nucleus | 29.12 | 31.02 |
| TraesCS7D01G166500.1 | Wheat | nucleus | 29.89 | 30.95 |
| TraesCS3D01G468400.1 | Wheat | nucleus | 31.42 | 30.94 |
| VIT_11s0016g01320.t01 | Wine grape | nucleus | 33.33 | 30.63 |
| KRH06177 | Soybean | nucleus | 33.33 | 30.53 |
| AT4G09460.1 | Thale cress | nucleus | 27.59 | 30.51 |
| AT1G22640.1 | Thale cress | nucleus | 29.89 | 30.35 |
| TraesCS7B01G070400.1 | Wheat | nucleus | 29.5 | 30.32 |
| Zm00001d037118_P001 | Maize | nucleus | 31.42 | 30.04 |
| KRH02634 | Soybean | nucleus | 35.25 | 29.97 |
| TraesCS4D01G224500.1 | Wheat | nucleus | 26.44 | 29.87 |
| Zm00001d044975_P001 | Maize | nucleus | 31.03 | 29.78 |
| KRH19274 | Soybean | nucleus | 34.48 | 29.61 |
| TraesCS7A01G165700.1 | Wheat | nucleus | 29.5 | 29.39 |
| AT2G16720.1 | Thale cress | nucleus | 30.27 | 29.37 |
| EER92144 | Sorghum | nucleus | 32.95 | 29.25 |
| KRH47594 | Soybean | nucleus | 30.65 | 29.2 |
| GSMUA_Achr6P04400_001 | Banana | nucleus | 30.65 | 29.09 |
| HORVU4Hr1G082610.1 | Barley | nucleus | 29.12 | 29.01 |
| HORVU4Hr1G063760.1 | Barley | nucleus | 25.67 | 29.0 |
| HORVU7Hr1G034630.1 | Barley | nucleus | 29.5 | 28.73 |
| AT3G13540.1 | Thale cress | nucleus | 27.2 | 28.51 |
| AT4G34990.1 | Thale cress | nucleus | 29.89 | 28.47 |
| AT4G38620.1 | Thale cress | nucleus | 30.27 | 28.01 |
| AT5G40330.1 | Thale cress | nucleus | 22.99 | 27.4 |
| AT3G27920.1 | Thale cress | nucleus | 22.61 | 25.88 |
| Solyc12g049300.1.1 | Tomato | nucleus | 34.1 | 25.28 |
| AT2G47460.1 | Thale cress | nucleus | 28.74 | 20.22 |
| AT5G49330.1 | Thale cress | nucleus | 25.67 | 19.59 |
| AT3G62610.1 | Thale cress | nucleus | 24.52 | 18.66 |
| PGSC0003DMT400030322 | Potato | nucleus | 3.83 | 6.1 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:833520 | UniProt:A0A1P8BFG0 | ProteinID:ANM70339.1 | ArrayExpress:AT5G35550 |
| EnsemblPlantsGene:AT5G35550 | RefSeq:AT5G35550 | TAIR:AT5G35550 | RefSeq:AT5G35550-TAIR-G | EnsemblPlants:AT5G35550.2 | Unigene:At.6888 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017877 |
| InterPro:IPR017930 | InterPro:Myb-like_dom | InterPro:Myb_dom | RefSeq:NP_001331958.1 | PFAM:PF00249 | PFscan:PS50090 |
| PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF459 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 |
| Symbol:TT2 | UniParc:UPI000848F5CD | : | : | : | : |
Description
TT2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT5G35550]
Coordinates
chr5:+:13726743..13727961
Molecular Weight (calculated)
29592.7 Da
IEP (calculated)
9.595
GRAVY (calculated)
-0.501
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTRSLEITS PLTAKANGAL SLTKLVLISL STDPSLYLLR TIIVLAHIKG LKRCGKSCRL RWKNYLRPGI KRGNISSDEE ELIIRLHNLL GNRWSLIAGR
101: LPGRTDNEIK NHWNSNLRKR LPKTQTKQPK RIKHSTNNEN NVCVIRTKAI RCSKTLLFSD LSLQKKSSTS PLPLKEQEMD QGGSSLMGDL EFDFDRIHSE
201: FHFPDLMDFD GLDCGNVTSL VSSNEILGEL VPAQGNLDLN RPFTSCHHRG DDEDWLRDFT C
101: LPGRTDNEIK NHWNSNLRKR LPKTQTKQPK RIKHSTNNEN NVCVIRTKAI RCSKTLLFSD LSLQKKSSTS PLPLKEQEMD QGGSSLMGDL EFDFDRIHSE
201: FHFPDLMDFD GLDCGNVTSL VSSNEILGEL VPAQGNLDLN RPFTSCHHRG DDEDWLRDFT C
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.