Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P27380_001 | Banana | nucleus | 65.09 | 68.85 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.91 | 57.05 |
| TraesCS4D01G319800.1 | Wheat | nucleus | 42.91 | 52.68 |
| GSMUA_Achr2P20600_001 | Banana | nucleus | 32.0 | 50.29 |
| GSMUA_Achr11P... | Banana | nucleus | 30.18 | 49.7 |
| TraesCS7B01G070400.1 | Wheat | nucleus | 45.45 | 49.21 |
| TraesCS5A01G495500.1 | Wheat | nucleus | 43.27 | 49.17 |
| GSMUA_Achr9P24180_001 | Banana | nucleus | 30.91 | 49.13 |
| TraesCS4D01G319700.1 | Wheat | nucleus | 43.27 | 48.97 |
| TraesCS4B01G323300.1 | Wheat | nucleus | 42.91 | 48.16 |
| TraesCS7D01G166500.1 | Wheat | nucleus | 44.0 | 48.02 |
| TraesCS7A01G165700.1 | Wheat | nucleus | 45.09 | 47.33 |
| GSMUA_Achr3P07950_001 | Banana | nucleus | 39.64 | 45.8 |
| GSMUA_Achr10P... | Banana | nucleus | 46.18 | 45.68 |
| GSMUA_Achr6P07260_001 | Banana | mitochondrion | 32.36 | 44.72 |
| GSMUA_Achr1P02420_001 | Banana | nucleus | 31.64 | 44.62 |
| TraesCS4D01G224500.1 | Wheat | nucleus | 37.45 | 44.59 |
| HORVU7Hr1G034630.1 | Barley | nucleus | 43.27 | 44.4 |
| GSMUA_Achr3P07940_001 | Banana | nucleus | 45.09 | 43.97 |
| Zm00001d037118_P001 | Maize | nucleus | 43.64 | 43.96 |
| HORVU4Hr1G082610.1 | Barley | nucleus | 41.82 | 43.89 |
| GSMUA_Achr8P33900_001 | Banana | nucleus | 32.36 | 43.84 |
| Zm00001d044975_P001 | Maize | nucleus | 43.27 | 43.75 |
| GSMUA_Achr5P26000_001 | Banana | nucleus | 33.09 | 43.33 |
| GSMUA_Achr4P25710_001 | Banana | nucleus | 30.18 | 43.23 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.18 | 42.78 |
| GSMUA_Achr8P32480_001 | Banana | nucleus | 30.55 | 42.0 |
| HORVU4Hr1G063760.1 | Barley | nucleus | 35.27 | 41.99 |
| GSMUA_Achr9P16040_001 | Banana | nucleus | 38.91 | 41.63 |
| GSMUA_Achr8P22690_001 | Banana | nucleus | 43.27 | 41.03 |
| GSMUA_Achr3P22200_001 | Banana | nucleus | 32.0 | 40.55 |
| GSMUA_Achr10P... | Banana | nucleus | 31.64 | 40.09 |
| GSMUA_Achr10P... | Banana | nucleus | 29.45 | 39.32 |
| GSMUA_Achr5P17010_001 | Banana | nucleus | 32.73 | 37.34 |
| GSMUA_Achr3P27700_001 | Banana | nucleus | 37.09 | 37.23 |
| GSMUA_Achr6P25420_001 | Banana | nucleus | 32.0 | 37.13 |
| GSMUA_Achr1P26520_001 | Banana | nucleus | 32.36 | 36.93 |
| Bra035532.1-P | Field mustard | nucleus | 34.91 | 36.92 |
| CDX84119 | Canola | nucleus | 34.91 | 36.78 |
| CDY49363 | Canola | nucleus | 34.91 | 36.78 |
| GSMUA_Achr6P09620_001 | Banana | nucleus | 26.55 | 36.5 |
| GSMUA_Achr1P07550_001 | Banana | nucleus | 31.27 | 36.29 |
| GSMUA_Achr11P... | Banana | nucleus | 29.09 | 34.04 |
| GSMUA_Achr7P18560_001 | Banana | nucleus | 33.09 | 33.83 |
| GSMUA_Achr9P08600_001 | Banana | nucleus | 33.45 | 33.82 |
| GSMUA_Achr4P21700_001 | Banana | nucleus | 28.36 | 33.62 |
| GSMUA_Achr2P19380_001 | Banana | nucleus | 29.82 | 33.61 |
| GSMUA_Achr7P18550_001 | Banana | nucleus | 31.64 | 32.95 |
| GSMUA_Achr5P01180_001 | Banana | nucleus | 30.91 | 32.69 |
| GSMUA_Achr3P21000_001 | Banana | nucleus | 30.18 | 32.68 |
| GSMUA_Achr2P17960_001 | Banana | nucleus | 30.18 | 32.17 |
| GSMUA_Achr6P12930_001 | Banana | nucleus | 33.45 | 32.17 |
| GSMUA_Achr8P14540_001 | Banana | nucleus | 29.82 | 31.54 |
| AT5G35550.2 | Thale cress | nucleus | 29.09 | 30.65 |
| GSMUA_Achr6P14840_001 | Banana | nucleus | 31.64 | 30.0 |
| GSMUA_Achr7P13700_001 | Banana | nucleus | 32.36 | 28.99 |
| GSMUA_Achr10P... | Banana | nucleus | 31.27 | 28.86 |
| GSMUA_Achr10P... | Banana | nucleus | 29.45 | 28.52 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 32.73 | 28.04 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.36 | 27.81 |
| GSMUA_Achr5P06530_001 | Banana | nucleus | 32.73 | 24.0 |
| GSMUA_Achr6P02530_001 | Banana | nucleus | 30.18 | 22.99 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 30.91 | 22.91 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P04400_001 | EnsemblPlants:GSMUA_Achr6T04400_001 | EnsemblPlantsGene:GSMUA_Achr6G04400_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF459 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002965B14 | UniProt:M0T438 | MapMan:15.5.2.1 | : | : |
Description
myb-like DNA-binding domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G04400_001]
Coordinates
chr6:-:3004586..3005674
Molecular Weight (calculated)
30412.9 Da
IEP (calculated)
8.225
GRAVY (calculated)
-0.603
Length
275 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRKPCCAKE GLNRGAWTAH EDHILKSYID THGEGKWRSL PKRAGLKRCG KSCRLRWLNY LRPGIKRGNI SDDEDELIIR LHKLLGNRWS LIAGRLPGRT
101: DNEIKNYWNT TLGKKAYGKA YQPKPCMSNN SAAGPAAITA KAAPDHTAVV VQTKAQRCTK TFFHHDQALL VSSSTHQQHL QPASKPSMSP PKASPDAPAN
201: ADPSRAAGDL PLTVGEEDED PCFSMSLDST FLLSGLSTEF WMESDSLQPH IEFNLSSVTA FLDADDDWLN WTPSC
101: DNEIKNYWNT TLGKKAYGKA YQPKPCMSNN SAAGPAAITA KAAPDHTAVV VQTKAQRCTK TFFHHDQALL VSSSTHQQHL QPASKPSMSP PKASPDAPAN
201: ADPSRAAGDL PLTVGEEDED PCFSMSLDST FLLSGLSTEF WMESDSLQPH IEFNLSSVTA FLDADDDWLN WTPSC
001: MGKRATTSVR REELNRGAWT DHEDKILRDY ITTHGEGKWS TLPNQAGLKR CGKSCRLRWK NYLRPGIKRG NISSDEEELI IRLHNLLGNR WSLIAGRLPG
101: RTDNEIKNHW NSNLRKRLPK TQTKQPKRIK HSTNNENNVC VIRTKAIRCS KTLLFSDLSL QKKSSTSPLP LKEQEMDQGG SSLMGDLEFD FDRIHSEFHF
201: PDLMDFDGLD CGNVTSLVSS NEILGELVPA QGNLDLNRPF TSCHHRGDDE DWLRDFTC
101: RTDNEIKNHW NSNLRKRLPK TQTKQPKRIK HSTNNENNVC VIRTKAIRCS KTLLFSDLSL QKKSSTSPLP LKEQEMDQGG SSLMGDLEFD FDRIHSEFHF
201: PDLMDFDGLD CGNVTSLVSS NEILGELVPA QGNLDLNRPF TSCHHRGDDE DWLRDFTC
Arabidopsis Description
TT2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT5G35550]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.