Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P07940_001 | Banana | nucleus | 66.21 | 68.09 |
| GSMUA_Achr9P16040_001 | Banana | nucleus | 58.97 | 66.54 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.31 | 57.05 |
| VIT_11s0016g01310.t01 | Wine grape | nucleus | 39.66 | 52.27 |
| GSMUA_Achr11P... | Banana | nucleus | 28.62 | 49.7 |
| GSMUA_Achr9P24180_001 | Banana | nucleus | 29.31 | 49.13 |
| GSMUA_Achr2P20600_001 | Banana | nucleus | 29.31 | 48.57 |
| GSMUA_Achr10P... | Banana | nucleus | 43.79 | 45.68 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.34 | 45.36 |
| GSMUA_Achr6P07260_001 | Banana | mitochondrion | 31.03 | 45.23 |
| GSMUA_Achr8P32480_001 | Banana | nucleus | 30.69 | 44.5 |
| GSMUA_Achr9P27380_001 | Banana | nucleus | 39.66 | 44.23 |
| GSMUA_Achr8P33900_001 | Banana | nucleus | 30.34 | 43.35 |
| GSMUA_Achr6P04400_001 | Banana | nucleus | 41.03 | 43.27 |
| GSMUA_Achr3P07950_001 | Banana | nucleus | 35.17 | 42.86 |
| VIT_11s0016g01320.t01 | Wine grape | nucleus | 41.72 | 42.61 |
| GSMUA_Achr10P... | Banana | nucleus | 30.0 | 42.23 |
| GSMUA_Achr1P02420_001 | Banana | nucleus | 28.28 | 42.05 |
| GSMUA_Achr5P26000_001 | Banana | nucleus | 30.34 | 41.9 |
| GSMUA_Achr3P22200_001 | Banana | nucleus | 30.34 | 40.55 |
| GSMUA_Achr10P... | Banana | nucleus | 30.34 | 40.55 |
| GSMUA_Achr3P27700_001 | Banana | nucleus | 38.28 | 40.51 |
| GSMUA_Achr4P25710_001 | Banana | nucleus | 26.55 | 40.1 |
| GSMUA_Achr6P09620_001 | Banana | nucleus | 26.55 | 38.5 |
| GSMUA_Achr6P25420_001 | Banana | nucleus | 30.69 | 37.55 |
| GSMUA_Achr5P17010_001 | Banana | nucleus | 31.03 | 37.34 |
| GSMUA_Achr1P26520_001 | Banana | nucleus | 30.69 | 36.93 |
| GSMUA_Achr1P07550_001 | Banana | nucleus | 29.66 | 36.29 |
| GSMUA_Achr3P21000_001 | Banana | nucleus | 30.69 | 35.04 |
| GSMUA_Achr4P21700_001 | Banana | nucleus | 27.59 | 34.48 |
| GSMUA_Achr7P18550_001 | Banana | nucleus | 31.03 | 34.09 |
| GSMUA_Achr11P... | Banana | nucleus | 27.59 | 34.04 |
| GSMUA_Achr7P18560_001 | Banana | nucleus | 31.38 | 33.83 |
| GSMUA_Achr2P19380_001 | Banana | nucleus | 28.28 | 33.61 |
| GSMUA_Achr9P08600_001 | Banana | nucleus | 30.34 | 32.35 |
| GSMUA_Achr6P12930_001 | Banana | nucleus | 31.38 | 31.82 |
| GSMUA_Achr2P17960_001 | Banana | nucleus | 28.28 | 31.78 |
| GSMUA_Achr5P01180_001 | Banana | nucleus | 27.93 | 31.15 |
| GSMUA_Achr6P14840_001 | Banana | nucleus | 30.34 | 30.34 |
| GSMUA_Achr7P13700_001 | Banana | nucleus | 31.72 | 29.97 |
| GSMUA_Achr10P... | Banana | nucleus | 30.34 | 29.53 |
| GSMUA_Achr8P14540_001 | Banana | nucleus | 26.21 | 29.23 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.07 | 29.06 |
| GSMUA_Achr10P... | Banana | nucleus | 27.59 | 28.17 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 30.34 | 27.41 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 32.07 | 25.07 |
| GSMUA_Achr6P02530_001 | Banana | nucleus | 31.03 | 24.93 |
| GSMUA_Achr5P06530_001 | Banana | nucleus | 31.72 | 24.53 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P22690_001 | EnsemblPlants:GSMUA_Achr8T22690_001 | EnsemblPlantsGene:GSMUA_Achr8G22690_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF459 | PFAM:PF00249 | PFscan:PS51294 | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI000296D0B7 | UniProt:M0TSS2 | MapMan:15.5.2.1 | : | : | : |
Description
MybPA2 [Source:GMGC_GENE;Acc:GSMUA_Achr8G22690_001]
Coordinates
chr8:+:27268546..27269582
Molecular Weight (calculated)
32481.4 Da
IEP (calculated)
8.487
GRAVY (calculated)
-0.759
Length
290 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRPCCSKE GLNRGAWSAC EDKILSDYIK THGEGKWRDL PKRAGLKRCG KSCRLRWLNY LRPDIKRGNI TEDEESLIIK LHRLLGNRWS LIAGRLPGRT
101: DNEIKNYWNT NLSKKMTSPR TCIRRPVKGK EARKEESPEE VKAAGEASAV IRTKAVRCTK VYLPSPPDDP PTHHGSKPTN NGSPSSSVPR DADPSGWFFE
201: DFNMEELVPS FQDDCFLQLR MDEVQDGGNM NGIVGDDLLW FCDAVHQDFR GSTDRPELQV AAEIGTLASL IDSVENGKAN GGARHMVSRS
101: DNEIKNYWNT NLSKKMTSPR TCIRRPVKGK EARKEESPEE VKAAGEASAV IRTKAVRCTK VYLPSPPDDP PTHHGSKPTN NGSPSSSVPR DADPSGWFFE
201: DFNMEELVPS FQDDCFLQLR MDEVQDGGNM NGIVGDDLLW FCDAVHQDFR GSTDRPELQV AAEIGTLASL IDSVENGKAN GGARHMVSRS
001: MGKRATTSVR REELNRGAWT DHEDKILRDY ITTHGEGKWS TLPNQAGLKR CGKSCRLRWK NYLRPGIKRG NISSDEEELI IRLHNLLGNR WSLIAGRLPG
101: RTDNEIKNHW NSNLRKRLPK TQTKQPKRIK HSTNNENNVC VIRTKAIRCS KTLLFSDLSL QKKSSTSPLP LKEQEMDQGG SSLMGDLEFD FDRIHSEFHF
201: PDLMDFDGLD CGNVTSLVSS NEILGELVPA QGNLDLNRPF TSCHHRGDDE DWLRDFTC
101: RTDNEIKNHW NSNLRKRLPK TQTKQPKRIK HSTNNENNVC VIRTKAIRCS KTLLFSDLSL QKKSSTSPLP LKEQEMDQGG SSLMGDLEFD FDRIHSEFHF
201: PDLMDFDGLD CGNVTSLVSS NEILGELVPA QGNLDLNRPF TSCHHRGDDE DWLRDFTC
Arabidopsis Description
TT2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT5G35550]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.