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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr11P... Banana nucleus 74.57 77.25
GSMUA_AchrUn_... Banana nucleus 65.9 76.51
GSMUA_Achr2P20600_001 Banana nucleus 71.68 70.86
GSMUA_Achr8P33900_001 Banana nucleus 76.88 65.52
GSMUA_Achr1P02420_001 Banana nucleus 73.41 65.13
KRH60702 Soybean nucleus 76.3 62.86
GSMUA_Achr6P07260_001 Banana mitochondrion 68.79 59.8
GSMUA_Achr10P... Banana nucleus 73.99 58.99
GSMUA_Achr1P26520_001 Banana nucleus 80.35 57.68
GSMUA_Achr5P26000_001 Banana nucleus 69.94 57.62
GSMUA_Achr3P22200_001 Banana nucleus 71.68 57.14
GSMUA_Achr8P32480_001 Banana nucleus 65.32 56.5
KRH51400 Soybean nucleus 75.72 55.74
GSMUA_Achr1P07550_001 Banana nucleus 76.3 55.7
VIT_03s0038g02310.t01 Wine grape nucleus 80.35 55.38
GSMUA_AchrUn_... Banana nucleus 61.27 54.64
KRH29280 Soybean nucleus 76.88 54.06
GSMUA_Achr4P25710_001 Banana nucleus 59.54 53.65
PGSC0003DMT400015803 Potato nucleus 78.03 53.15
Solyc01g111500.2.1 Tomato nucleus 76.88 52.78
KRH24301 Soybean nucleus 76.88 52.57
GSMUA_Achr6P25420_001 Banana nucleus 70.52 51.48
GSMUA_Achr10P... Banana nucleus 59.54 50.0
PGSC0003DMT400034372 Potato nucleus 76.3 49.25
Solyc10g055410.1.1 Tomato nucleus 77.46 49.08
GSMUA_Achr5P17010_001 Banana nucleus 68.21 48.96
GSMUA_Achr9P08600_001 Banana nucleus 72.25 45.96
GSMUA_Achr6P09620_001 Banana nucleus 52.6 45.5
AT4G38620.1 Thale cress nucleus 73.99 45.39
Bra010736.1-P Field mustard nucleus 73.41 44.88
CDX90285 Canola nucleus 73.41 44.88
Bra033572.1-P Field mustard nucleus 74.57 43.88
CDX72743 Canola nucleus 74.57 43.88
CDY22416 Canola nucleus 74.57 43.88
CDY52797 Canola nucleus 64.16 43.02
GSMUA_Achr6P12930_001 Banana nucleus 71.1 43.01
GSMUA_Achr5P01180_001 Banana nucleus 64.16 42.69
CDY12092 Canola nucleus 73.41 41.78
GSMUA_Achr10P... Banana nucleus 68.21 41.55
GSMUA_Achr3P21000_001 Banana nucleus 60.69 41.34
GSMUA_Achr3P07950_001 Banana nucleus 49.71 36.13
GSMUA_Achr11P... Banana nucleus 45.09 33.19
GSMUA_Achr3P27700_001 Banana nucleus 51.45 32.48
GSMUA_Achr9P27380_001 Banana nucleus 48.55 32.31
GSMUA_Achr9P16040_001 Banana nucleus 47.4 31.91
GSMUA_Achr7P18550_001 Banana nucleus 48.55 31.82
GSMUA_Achr4P21700_001 Banana nucleus 42.2 31.47
GSMUA_Achr7P18560_001 Banana nucleus 48.55 31.23
GSMUA_Achr8P14540_001 Banana nucleus 46.82 31.15
GSMUA_Achr2P17960_001 Banana nucleus 46.24 31.01
GSMUA_Achr6P04400_001 Banana nucleus 49.13 30.91
GSMUA_Achr2P19380_001 Banana nucleus 43.35 30.74
GSMUA_Achr3P07940_001 Banana nucleus 49.13 30.14
GSMUA_Achr10P... Banana nucleus 47.98 29.86
GSMUA_Achr8P22690_001 Banana nucleus 49.13 29.31
GSMUA_Achr10P... Banana nucleus 49.13 28.52
GSMUA_AchrUn_... Banana nucleus 52.02 28.12
GSMUA_Achr6P14840_001 Banana nucleus 46.24 27.59
GSMUA_Achr5P21250_001 Banana nucleus 50.87 27.41
GSMUA_Achr7P13700_001 Banana nucleus 47.98 27.04
GSMUA_Achr8P10470_001 Banana nucleus 52.02 24.26
GSMUA_Achr6P02530_001 Banana nucleus 48.55 23.27
GSMUA_Achr5P06530_001 Banana nucleus 49.13 22.67
Protein Annotations
EnsemblPlants:GSMUA_Achr9P24180_001EnsemblPlants:GSMUA_Achr9T24180_001EnsemblPlantsGene:GSMUA_Achr9G24180_001Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0005488InterPro:Homeobox-like_sfInterPro:IPR017930InterPro:Myb_domInterPro:SANT/Myb
PANTHER:PTHR10641PANTHER:PTHR10641:SF741PFAM:PF00249PFscan:PS51294SMART:SM00717SUPFAM:SSF46689
UniParc:UPI000295AE12UniProt:M0U325MapMan:15.5.2.1:::
Description
Myb-related protein 308 [Source:GMGC_GENE;Acc:GSMUA_Achr9G24180_001]
Coordinates
chr9:-:28998002..28998664
Molecular Weight (calculated)
19742.8 Da
IEP (calculated)
9.638
GRAVY (calculated)
-0.688
Length
173 amino acids
Sequence
(BLAST)
001: MGRSPCCERA HTNKGAWTKE EDDRLIAYIR AHGEGCWRSL PKAAGLLRCG KSCRLRWINY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGKLPGRT
101: DNEIKNYWNT HIRKKLLSMG VDPATHRPIH DSAATITAET SARRQHHRPP KCPDLNLELC ISPPFQQAPL HPI
Best Arabidopsis Sequence Match ( AT4G38620.1 )
(BLAST)
001: MGRSPCCEKA HTNKGAWTKE EDERLVAYIK AHGEGCWRSL PKAAGLLRCG KSCRLRWINY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIRRKLINRG IDPTSHRPIQ ESSASQDSKP TQLEPVTSNT INISFTSAPK VETFHESISF PGKSEKISML TFKEEKDECP VQEKFPDLNL
201: ELRISLPDDV DRLQGHGKST TPRCFKCSLG MINGMECRCG RMRCDVVGGS SKGSDMSNGF DFLGLAKKET TSLLGFRSLE MK
Arabidopsis Description
MYB4Transcription repressor MYB4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZP1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.