Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 51.9 | 82.55 |
| GSMUA_Achr2P20600_001 | Banana | nucleus | 55.27 | 74.86 |
| GSMUA_Achr11P... | Banana | nucleus | 50.21 | 71.26 |
| GSMUA_Achr9P08600_001 | Banana | nucleus | 81.01 | 70.59 |
| GSMUA_Achr9P24180_001 | Banana | nucleus | 51.48 | 70.52 |
| GSMUA_Achr3P22200_001 | Banana | nucleus | 62.45 | 68.2 |
| GSMUA_Achr6P07260_001 | Banana | mitochondrion | 54.43 | 64.82 |
| GSMUA_Achr1P02420_001 | Banana | nucleus | 53.16 | 64.62 |
| GSMUA_Achr5P26000_001 | Banana | nucleus | 56.54 | 63.81 |
| GSMUA_Achr8P33900_001 | Banana | nucleus | 54.43 | 63.55 |
| GSMUA_Achr8P32480_001 | Banana | nucleus | 53.59 | 63.5 |
| GSMUA_Achr10P... | Banana | nucleus | 56.96 | 62.21 |
| GSMUA_Achr5P17010_001 | Banana | nucleus | 60.76 | 59.75 |
| EES16743 | Sorghum | nucleus | 54.01 | 59.53 |
| Zm00001d012255_P001 | Maize | nucleus | 62.87 | 59.36 |
| TraesCS1A01G268800.1 | Wheat | nucleus | 61.18 | 58.7 |
| TraesCS1B01G279400.1 | Wheat | nucleus | 60.76 | 58.3 |
| TraesCS1D01G268900.1 | Wheat | nucleus | 60.34 | 57.89 |
| HORVU1Hr1G074260.1 | Barley | nucleus | 61.18 | 57.77 |
| Os05t0429900-01 | Rice | nucleus | 62.45 | 56.92 |
| Zm00001d042665_P001 | Maize | nucleus | 62.87 | 56.87 |
| TraesCS3A01G384400.1 | Wheat | nucleus | 63.71 | 56.55 |
| HORVU3Hr1G082210.1 | Barley | nucleus | 64.14 | 56.3 |
| TraesCS3B01G416400.1 | Wheat | nucleus | 63.29 | 56.18 |
| TraesCS3D01G377300.1 | Wheat | nucleus | 63.71 | 55.72 |
| GSMUA_Achr1P26520_001 | Banana | nucleus | 56.54 | 55.6 |
| EES01839 | Sorghum | nucleus | 62.87 | 55.39 |
| GSMUA_Achr1P07550_001 | Banana | nucleus | 55.27 | 55.27 |
| Zm00001d041853_P001 | Maize | nucleus | 52.32 | 54.87 |
| GSMUA_Achr4P25710_001 | Banana | nucleus | 44.3 | 54.69 |
| TraesCS5A01G111300.1 | Wheat | nucleus | 56.12 | 54.51 |
| Os01t0874300-01 | Rice | extracellular, nucleus | 65.82 | 54.36 |
| KXG22070 | Sorghum | nucleus | 59.49 | 53.82 |
| Zm00001d038338_P001 | Maize | nucleus | 58.23 | 53.49 |
| Bra000680.1-P | Field mustard | nucleus | 50.21 | 53.12 |
| CDX90721 | Canola | nucleus | 50.21 | 53.12 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.46 | 53.09 |
| AT1G35515.1 | Thale cress | nucleus | 47.26 | 52.83 |
| Zm00001d010201_P001 | Maize | nucleus | 55.27 | 52.61 |
| CDY05057 | Canola | nucleus | 49.79 | 51.98 |
| GSMUA_Achr10P... | Banana | nucleus | 45.15 | 51.94 |
| TraesCS4D01G092900.1 | Wheat | nucleus | 62.03 | 50.87 |
| HORVU5Hr1G036900.1 | Barley | nucleus | 56.54 | 50.76 |
| TraesCS4A01G217800.1 | Wheat | nucleus | 61.6 | 50.69 |
| AT4G09460.1 | Thale cress | nucleus | 50.21 | 50.42 |
| Zm00001d004744_P001 | Maize | nucleus | 57.81 | 49.82 |
| TraesCS5B01G119300.1 | Wheat | nucleus | 56.54 | 49.26 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 59.07 | 48.28 |
| Zm00001d053060_P001 | Maize | nucleus | 58.65 | 48.26 |
| Solyc06g065100.2.1 | Tomato | nucleus | 56.54 | 48.03 |
| Os11t0180900-00 | Rice | nucleus | 59.49 | 47.8 |
| GSMUA_Achr6P12930_001 | Banana | nucleus | 57.38 | 47.55 |
| PGSC0003DMT400080427 | Potato | nucleus | 56.96 | 47.37 |
| GSMUA_Achr5P01180_001 | Banana | nucleus | 51.48 | 46.92 |
| KRH63931 | Soybean | nucleus | 59.07 | 46.36 |
| KRH54016 | Soybean | nucleus | 58.65 | 46.18 |
| GSMUA_Achr10P... | Banana | nucleus | 54.43 | 45.42 |
| OQU78830 | Sorghum | nucleus | 54.01 | 45.39 |
| OQU83016 | Sorghum | nucleus | 59.92 | 45.08 |
| GSMUA_Achr6P09620_001 | Banana | nucleus | 37.97 | 45.0 |
| TraesCS5D01G128200.2 | Wheat | nucleus | 56.96 | 44.12 |
| GSMUA_Achr3P21000_001 | Banana | nucleus | 45.15 | 42.13 |
| HORVU4Hr1G018360.2 | Barley | nucleus | 61.18 | 39.73 |
| TraesCS4B01G096500.1 | Wheat | nucleus, plastid | 61.6 | 38.32 |
| GSMUA_Achr3P07950_001 | Banana | nucleus | 36.71 | 36.55 |
| GSMUA_Achr11P... | Banana | nucleus | 35.02 | 35.32 |
| GSMUA_Achr9P16040_001 | Banana | nucleus | 36.71 | 33.85 |
| GSMUA_Achr3P27700_001 | Banana | nucleus | 38.4 | 33.21 |
| GSMUA_Achr9P27380_001 | Banana | nucleus | 36.29 | 33.08 |
| GSMUA_Achr7P18550_001 | Banana | nucleus | 36.71 | 32.95 |
| GSMUA_Achr8P14540_001 | Banana | nucleus | 35.87 | 32.69 |
| GSMUA_Achr2P17960_001 | Banana | nucleus | 35.02 | 32.17 |
| GSMUA_Achr6P04400_001 | Banana | nucleus | 37.13 | 32.0 |
| GSMUA_Achr4P21700_001 | Banana | nucleus | 31.22 | 31.9 |
| GSMUA_Achr2P19380_001 | Banana | nucleus | 32.49 | 31.56 |
| GSMUA_Achr7P18560_001 | Banana | nucleus | 35.44 | 31.23 |
| GSMUA_Achr3P07940_001 | Banana | nucleus | 37.13 | 31.21 |
| GSMUA_Achr8P22690_001 | Banana | nucleus | 37.55 | 30.69 |
| GSMUA_Achr10P... | Banana | nucleus | 37.55 | 29.87 |
| GSMUA_Achr10P... | Banana | nucleus | 35.02 | 29.86 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.24 | 29.06 |
| GSMUA_Achr6P14840_001 | Banana | nucleus | 35.44 | 28.97 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 37.13 | 27.41 |
| GSMUA_Achr7P13700_001 | Banana | nucleus | 35.44 | 27.36 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 38.82 | 24.8 |
| GSMUA_Achr5P06530_001 | Banana | nucleus | 38.82 | 24.53 |
| GSMUA_Achr6P02530_001 | Banana | nucleus | 36.29 | 23.82 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P25420_001 | EnsemblPlants:GSMUA_Achr6T25420_001 | EnsemblPlantsGene:GSMUA_Achr6G25420_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF741 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI000294CE40 | UniProt:M0TA38 | MapMan:15.5.2.1 | : | : |
Description
Myb-related protein 308 [Source:GMGC_GENE;Acc:GSMUA_Achr6G25420_001]
Coordinates
chr6:-:26510387..26511393
Molecular Weight (calculated)
26411.5 Da
IEP (calculated)
8.433
GRAVY (calculated)
-0.568
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKA HTNKGAWTKE EDQKLIAYIK AHGEGCWRSL PSAAGLLRCG KSCRLRWINY LRPDLKRGNF TEEEDALIIK LHGLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPQTHRPTT GAATLTAPQR QGVFIPITVP RDTAVSDSAD DGRMSSDASH DEDRDRCLDL DLSMSLLPHR SPKHYTGGIC
201: LCCHLGFQSC GACSGQPIPN PCVFRYFRPL EEGQGID
101: DNEIKNYWNT HIKRKLLSRG IDPQTHRPTT GAATLTAPQR QGVFIPITVP RDTAVSDSAD DGRMSSDASH DEDRDRCLDL DLSMSLLPHR SPKHYTGGIC
201: LCCHLGFQSC GACSGQPIPN PCVFRYFRPL EEGQGID
001: MGRSPCCEKA HTNKGAWTKE EDQRLVDYIR NHGEGCWRSL PKSAGLLRCG KSCRLRWINY LRPDLKRGNF TDDEDQIIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSHG IDPQTHRQIN ESKTVSSQVV VPIQNDAVEY SFSNLAVKPK TENSSDNGAS TSGTTTDEDL RQNGECYYSD NSGHIKLNLD
201: LTLGFGSWSG RIVGVGSSAD SKPWCDPVME ARLSLL
101: DNEIKNYWNT HIKRKLLSHG IDPQTHRQIN ESKTVSSQVV VPIQNDAVEY SFSNLAVKPK TENSSDNGAS TSGTTTDEDL RQNGECYYSD NSGHIKLNLD
201: LTLGFGSWSG RIVGVGSSAD SKPWCDPVME ARLSLL
Arabidopsis Description
MYB6Transcription repressor MYB6 [Source:UniProtKB/Swiss-Prot;Acc:Q38851]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.