Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G119300.1 | Wheat | nucleus | 87.91 | 98.9 |
| TraesCS5A01G111300.1 | Wheat | nucleus | 76.8 | 96.31 |
| HORVU5Hr1G036900.1 | Barley | nucleus | 78.76 | 91.29 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.54 | 81.21 |
| GSMUA_Achr2P20600_001 | Banana | nucleus | 43.79 | 76.57 |
| GSMUA_Achr5P26000_001 | Banana | nucleus | 43.46 | 63.33 |
| GSMUA_Achr6P07260_001 | Banana | mitochondrion | 40.2 | 61.81 |
| GSMUA_Achr3P22200_001 | Banana | nucleus | 42.81 | 60.37 |
| GSMUA_Achr8P32480_001 | Banana | nucleus | 38.89 | 59.5 |
| GSMUA_Achr10P... | Banana | nucleus | 40.85 | 57.6 |
| GSMUA_Achr6P25420_001 | Banana | nucleus | 44.12 | 56.96 |
| TraesCS7D01G272400.1 | Wheat | nucleus | 43.14 | 56.41 |
| TraesCS1D01G268900.1 | Wheat | nucleus | 44.44 | 55.06 |
| AT1G35515.1 | Thale cress | nucleus | 36.6 | 52.83 |
| CDX90721 | Canola | nucleus | 38.56 | 52.68 |
| Bra000680.1-P | Field mustard | nucleus | 38.56 | 52.68 |
| GSMUA_Achr5P17010_001 | Banana | nucleus | 41.18 | 52.28 |
| TraesCS3D01G377300.1 | Wheat | nucleus | 45.75 | 51.66 |
| CDY05057 | Canola | nucleus | 38.24 | 51.54 |
| TraesCS5D01G335700.1 | Wheat | nucleus | 44.44 | 51.13 |
| AT4G09460.1 | Thale cress | nucleus | 38.89 | 50.42 |
| GSMUA_Achr9P08600_001 | Banana | nucleus | 44.44 | 50.0 |
| TraesCS4D01G092900.1 | Wheat | nucleus | 46.41 | 49.13 |
| Solyc06g065100.2.1 | Tomato | nucleus | 43.79 | 48.03 |
| PGSC0003DMT400080427 | Potato | nucleus | 43.46 | 46.67 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 43.79 | 46.21 |
| GSMUA_Achr6P12930_001 | Banana | nucleus | 43.14 | 46.15 |
| KRH54016 | Soybean | nucleus | 43.14 | 43.85 |
| KRH63931 | Soybean | nucleus | 42.81 | 43.38 |
| TraesCS4D01G319800.1 | Wheat | nucleus | 26.47 | 36.16 |
| TraesCS4D01G319700.1 | Wheat | nucleus | 27.45 | 34.57 |
| TraesCS7D01G166500.1 | Wheat | nucleus | 27.78 | 33.73 |
| TraesCS3D01G468400.1 | Wheat | nucleus | 28.76 | 33.21 |
| TraesCS3D01G257800.1 | Wheat | nucleus | 28.43 | 32.1 |
| TraesCS4D01G224500.1 | Wheat | nucleus | 24.18 | 32.03 |
| TraesCS1D01G021700.1 | Wheat | nucleus | 27.78 | 27.07 |
| TraesCS1D01G020900.1 | Wheat | nucleus | 28.43 | 25.66 |
| TraesCS4D01G187100.1 | Wheat | nucleus | 28.76 | 25.43 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G128200.2 | EnsemblPlantsGene:TraesCS5D01G128200 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017877 | InterPro:IPR017930 | InterPro:Myb-like_dom | InterPro:Myb_dom |
| InterPro:SANT/Myb | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF741 | PFAM:PF00249 | PFscan:PS50090 | PFscan:PS51294 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | TIGR:cd00167 | MapMan:15.5.2.1 | : |
Description
No Description!
Coordinates
chr5D:+:200501057..200502098
Molecular Weight (calculated)
32783.0 Da
IEP (calculated)
8.333
GRAVY (calculated)
-0.348
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKA HTNKGAWTKE EDQRLIAHIK AHGEGCWRSL PKAAGTTYSY LYLVCGLNIG MHAGRVGGDV DSCACTRVGL LRCGKSCRLR WINYLRPDLK
101: RGNFTDEEDE LIIKLHEFLG NKWSLIAGRL PGRTDNEIKN YWNTHVKRKL LARGVDPQTH RPLNAGTAAV QGMHTPSSPV VASGASPHQL AGGSSCSPDA
201: SGHSSDADDS VSLPPSLAGN LGVGMIDLNL SISPPCQPPL SREADGVLRT GYSEREKICL CLNRLGLHGG EGCSCVGSSS SSSLHPASSG VLRFLDASLF
301: RDPKVQ
101: RGNFTDEEDE LIIKLHEFLG NKWSLIAGRL PGRTDNEIKN YWNTHVKRKL LARGVDPQTH RPLNAGTAAV QGMHTPSSPV VASGASPHQL AGGSSCSPDA
201: SGHSSDADDS VSLPPSLAGN LGVGMIDLNL SISPPCQPPL SREADGVLRT GYSEREKICL CLNRLGLHGG EGCSCVGSSS SSSLHPASSG VLRFLDASLF
301: RDPKVQ
001: MGRSPCCEKA HMNKGAWTKE EDQLLVDYIR KHGEGCWRSL PRAAGLQRCG KSCRLRWMNY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
Arabidopsis Description
MYB3MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.