Skip to main content
crop-pal logo
Banana
Search for another protein from :
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr3P17620_001
GSMUA_Achr6P21490_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G38620.1 GSMUA_Achr3P17620_001 AT4G09820.1 15361138
AT4G38620.1 GSMUA_Achr6P21490_001 AT4G09820.1 15361138
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr9P24180_001 Banana nucleus 77.25 74.57
GSMUA_AchrUn_... Banana nucleus 65.87 73.83
GSMUA_Achr2P20600_001 Banana nucleus 71.26 68.0
GSMUA_Achr8P33900_001 Banana nucleus 77.84 64.04
GSMUA_Achr1P02420_001 Banana nucleus 71.86 61.54
GSMUA_Achr6P07260_001 Banana mitochondrion 68.26 57.29
GSMUA_Achr5P26000_001 Banana nucleus 71.86 57.14
GSMUA_Achr10P... Banana nucleus 73.65 56.68
GSMUA_Achr3P22200_001 Banana nucleus 72.46 55.76
GSMUA_Achr1P07550_001 Banana nucleus 78.44 55.27
GSMUA_Achr8P32480_001 Banana nucleus 65.27 54.5
GSMUA_Achr1P26520_001 Banana nucleus 78.44 54.36
GSMUA_Achr4P25710_001 Banana nucleus 61.68 53.65
PGSC0003DMT400015803 Potato nucleus 79.04 51.97
Solyc01g111500.2.1 Tomato nucleus 77.84 51.59
GSMUA_AchrUn_... Banana nucleus 59.28 51.03
GSMUA_Achr6P25420_001 Banana nucleus 71.26 50.21
PGSC0003DMT400034372 Potato nucleus 76.65 47.76
GSMUA_Achr5P17010_001 Banana nucleus 68.86 47.72
Solyc10g055410.1.1 Tomato nucleus 77.84 47.62
GSMUA_Achr10P... Banana nucleus 56.89 46.12
AT4G38620.1 Thale cress nucleus 75.45 44.68
Bra010736.1-P Field mustard nucleus 74.85 44.17
CDX90285 Canola nucleus 74.85 44.17
GSMUA_Achr6P09620_001 Banana nucleus 52.69 44.0
GSMUA_Achr9P08600_001 Banana nucleus 70.66 43.38
CDY52797 Canola nucleus 66.47 43.02
Bra033572.1-P Field mustard nucleus 75.45 42.86
CDX72743 Canola nucleus 75.45 42.86
CDY22416 Canola nucleus 75.45 42.86
GSMUA_Achr5P01180_001 Banana nucleus 65.87 42.31
GSMUA_Achr6P12930_001 Banana nucleus 71.86 41.96
GSMUA_Achr10P... Banana nucleus 70.06 41.2
CDY12092 Canola nucleus 74.25 40.79
GSMUA_Achr3P21000_001 Banana nucleus 59.28 38.98
GSMUA_Achr3P07950_001 Banana nucleus 50.3 35.29
GSMUA_Achr2P19380_001 Banana nucleus 47.9 32.79
GSMUA_Achr3P27700_001 Banana nucleus 53.29 32.48
GSMUA_Achr11P... Banana nucleus 45.51 32.34
GSMUA_Achr2P17960_001 Banana nucleus 49.1 31.78
GSMUA_Achr9P16040_001 Banana nucleus 48.5 31.52
GSMUA_Achr7P18550_001 Banana nucleus 49.1 31.06
GSMUA_Achr8P14540_001 Banana nucleus 47.9 30.77
GSMUA_Achr9P27380_001 Banana nucleus 47.9 30.77
GSMUA_Achr6P04400_001 Banana nucleus 49.7 30.18
GSMUA_Achr4P21700_001 Banana nucleus 41.92 30.17
GSMUA_Achr3P07940_001 Banana nucleus 50.9 30.14
GSMUA_Achr7P18560_001 Banana nucleus 47.9 29.74
GSMUA_Achr10P... Banana nucleus 51.5 28.86
GSMUA_Achr6P14840_001 Banana nucleus 49.7 28.62
GSMUA_Achr8P22690_001 Banana nucleus 49.7 28.62
GSMUA_Achr10P... Banana nucleus 47.31 28.42
GSMUA_Achr7P13700_001 Banana nucleus 51.5 28.01
GSMUA_AchrUn_... Banana nucleus 53.29 27.81
GSMUA_Achr5P21250_001 Banana nucleus 51.5 26.79
GSMUA_Achr8P10470_001 Banana nucleus 53.89 24.26
GSMUA_Achr5P06530_001 Banana nucleus 53.29 23.73
GSMUA_Achr6P02530_001 Banana nucleus 49.1 22.71
Protein Annotations
EnsemblPlants:GSMUA_Achr11P07180_001EnsemblPlants:GSMUA_Achr11T07180_001EnsemblPlantsGene:GSMUA_Achr11G07180_001Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676
GO:GO:0003677GO:GO:0005488InterPro:Homeobox-like_sfInterPro:IPR017930InterPro:Myb_domInterPro:SANT/Myb
PANTHER:PTHR10641PANTHER:PTHR10641:SF741PFAM:PF00249PFscan:PS51294SMART:SM00717SUPFAM:SSF46689
UniParc:UPI0002953062UniProt:M0RQ48MapMan:15.5.2.1:::
Description
Myb-related protein Zm38 [Source:GMGC_GENE;Acc:GSMUA_Achr11G07180_001]
Coordinates
chr11:-:5611045..5611874
Molecular Weight (calculated)
19281.2 Da
IEP (calculated)
9.453
GRAVY (calculated)
-0.746
Length
167 amino acids
Sequence
(BLAST)
001: MGRSPCCEKA HTNKGAWTKE EDERLIAHIR AHGEGGWRTL PRAAGLLRCG KSCRLRWINY LRPDLKRGNF TQEEDETIIN LHRLLGNRWS LIAARLPGRT
101: DNEIKNYWNT HIRRKLLSRG VDPITHRPFD EPPKCPDLNL ELCISPPLLR REPSFQLQLG ITDSATE
Best Arabidopsis Sequence Match ( AT1G22640.1 )
(BLAST)
001: MGRSPCCEKA HMNKGAWTKE EDQLLVDYIR KHGEGCWRSL PRAAGLQRCG KSCRLRWMNY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
Arabidopsis Description
MYB3MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.