Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 30.3 | 53.69 |
| GSMUA_Achr11P... | Banana | nucleus | 31.06 | 49.1 |
| GSMUA_Achr9P24180_001 | Banana | nucleus | 31.82 | 48.55 |
| GSMUA_Achr7P18560_001 | Banana | nucleus | 48.48 | 47.58 |
| GSMUA_Achr2P20600_001 | Banana | nucleus | 31.06 | 46.86 |
| GSMUA_Achr6P02530_001 | Banana | nucleus | 60.61 | 44.32 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.2 | 43.81 |
| GSMUA_Achr1P02420_001 | Banana | nucleus | 31.82 | 43.08 |
| GSMUA_Achr8P33900_001 | Banana | nucleus | 32.95 | 42.86 |
| GSMUA_Achr6P07260_001 | Banana | mitochondrion | 31.82 | 42.21 |
| GSMUA_Achr10P... | Banana | nucleus | 32.58 | 41.75 |
| GSMUA_Achr3P22200_001 | Banana | nucleus | 33.71 | 41.01 |
| GSMUA_Achr8P32480_001 | Banana | nucleus | 31.06 | 41.0 |
| GSMUA_Achr10P... | Banana | nucleus | 33.33 | 40.55 |
| GSMUA_Achr5P26000_001 | Banana | nucleus | 31.82 | 40.0 |
| GSMUA_Achr6P09620_001 | Banana | nucleus | 29.17 | 38.5 |
| GSMUA_Achr3P07950_001 | Banana | nucleus | 34.47 | 38.24 |
| GSMUA_Achr4P25710_001 | Banana | nucleus | 27.65 | 38.02 |
| GSMUA_Achr4P21700_001 | Banana | nucleus | 33.33 | 37.93 |
| GSMUA_Achr11P... | Banana | nucleus | 33.33 | 37.45 |
| VIT_04s0008g01840.t01 | Wine grape | nucleus | 31.82 | 37.17 |
| GSMUA_Achr5P17010_001 | Banana | nucleus | 33.71 | 36.93 |
| GSMUA_Achr6P25420_001 | Banana | nucleus | 32.95 | 36.71 |
| VIT_04s0008g01800.t01 | Wine grape | nucleus | 36.36 | 36.23 |
| GSMUA_Achr9P16040_001 | Banana | nucleus | 35.23 | 36.19 |
| GSMUA_Achr1P26520_001 | Banana | nucleus | 32.95 | 36.1 |
| GSMUA_Achr1P07550_001 | Banana | nucleus | 31.82 | 35.44 |
| VIT_13s0084g00530.t01 | Wine grape | nucleus | 34.09 | 34.22 |
| GSMUA_Achr2P17960_001 | Banana | nucleus | 32.95 | 33.72 |
| GSMUA_Achr3P07940_001 | Banana | nucleus | 35.98 | 33.69 |
| KRH47594 | Soybean | nucleus | 34.85 | 33.58 |
| GSMUA_Achr3P21000_001 | Banana | nucleus | 32.2 | 33.46 |
| GSMUA_Achr8P14540_001 | Banana | nucleus | 32.95 | 33.46 |
| GSMUA_Achr9P08600_001 | Banana | nucleus | 34.47 | 33.46 |
| GSMUA_Achr3P27700_001 | Banana | nucleus | 34.47 | 33.21 |
| VIT_04s0008g01820.t01 | Wine grape | nucleus | 35.98 | 31.99 |
| VIT_04s0008g01810.t01 | Wine grape | nucleus | 33.33 | 31.88 |
| GSMUA_Achr10P... | Banana | nucleus | 33.33 | 31.65 |
| GSMUA_Achr6P04400_001 | Banana | nucleus | 32.95 | 31.64 |
| GSMUA_Achr9P27380_001 | Banana | nucleus | 31.06 | 31.54 |
| KRH06177 | Soybean | nucleus | 33.71 | 31.23 |
| GSMUA_Achr8P22690_001 | Banana | nucleus | 34.09 | 31.03 |
| KRH02634 | Soybean | nucleus | 35.98 | 30.94 |
| VIT_11s0016g01300.t01 | Wine grape | nucleus | 35.23 | 30.9 |
| VIT_04s0008g01830.t01 | Wine grape | nucleus | 32.95 | 30.85 |
| GSMUA_Achr5P01180_001 | Banana | nucleus | 30.3 | 30.77 |
| KRH19274 | Soybean | nucleus | 35.23 | 30.59 |
| GSMUA_Achr2P19380_001 | Banana | nucleus | 27.65 | 29.92 |
| GSMUA_Achr10P... | Banana | nucleus | 31.82 | 29.58 |
| GSMUA_Achr6P12930_001 | Banana | nucleus | 31.82 | 29.37 |
| GSMUA_Achr7P13700_001 | Banana | nucleus | 33.33 | 28.66 |
| VIT_09s0002g01400.t01 | Wine grape | nucleus | 35.23 | 27.11 |
| GSMUA_Achr10P... | Banana | nucleus | 30.3 | 26.85 |
| Solyc12g049300.1.1 | Tomato | nucleus | 35.61 | 26.7 |
| GSMUA_Achr6P14840_001 | Banana | nucleus | 28.79 | 26.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.44 | 25.94 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 29.55 | 24.3 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 30.3 | 21.56 |
| GSMUA_Achr5P06530_001 | Banana | nucleus | 30.3 | 21.33 |
| PGSC0003DMT400030322 | Potato | nucleus | 1.52 | 2.44 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P18550_001 | EnsemblPlants:GSMUA_Achr7T18550_001 | EnsemblPlantsGene:GSMUA_Achr7G18550_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF459 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 |
| SUPFAM:SSF46689 | UniParc:UPI0002953A82 | UniProt:M0TIP2 | MapMan:15.5.2.1 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G18550_001]
Coordinates
chr7:+:21322148..21323514
Molecular Weight (calculated)
30214.2 Da
IEP (calculated)
8.065
GRAVY (calculated)
-0.534
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRNPCSSKE GFNKGSWSAI EDKILTDYIR AHGEGRWGKV PKGAGLSRCA RSCRLRWLNY LRPDIKRGNI SHEEEDLIIR LHNLLGNRWS LIAGRLPGRT
101: DNEIKNYWNT VLKKKVQGQS VDMHSGEDEH MNGKSQETTR CPKFGNSTGR NDPPSFPQHG KNKFGESLVD GDFFSETSFL APEDCDLFNP LMDSNHEELC
201: PRHFLDLNFF EIFESNLPKE HETLKCCVKM SASLLCTFVL LKENLLLFVL TCSGCMFLKL IIRT
101: DNEIKNYWNT VLKKKVQGQS VDMHSGEDEH MNGKSQETTR CPKFGNSTGR NDPPSFPQHG KNKFGESLVD GDFFSETSFL APEDCDLFNP LMDSNHEELC
201: PRHFLDLNFF EIFESNLPKE HETLKCCVKM SASLLCTFVL LKENLLLFVL TCSGCMFLKL IIRT
001: MGRSPCCEKA HMNKGAWTKE EDQLLVDYIR KHGEGCWRSL PRAAGLQRCG KSCRLRWMNY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH
Arabidopsis Description
MYB3MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.