Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47594 | Soybean | nucleus | 83.51 | 86.86 |
| KRG94424 | Soybean | nucleus | 18.25 | 56.52 |
| TraesCS3B01G515900.1 | Wheat | nucleus | 33.68 | 47.06 |
| KRH77336 | Soybean | nucleus | 29.12 | 45.6 |
| KRH28144 | Soybean | nucleus | 29.12 | 45.36 |
| KRH19274 | Soybean | nucleus | 47.37 | 44.41 |
| HORVU3Hr1G100500.1 | Barley | nucleus | 39.65 | 44.31 |
| TraesCS4D01G319800.1 | Wheat | nucleus | 34.39 | 43.75 |
| KRH02634 | Soybean | nucleus | 47.02 | 43.65 |
| KRH60702 | Soybean | nucleus | 31.58 | 42.86 |
| TraesCS3D01G468400.1 | Wheat | nucleus | 38.95 | 41.89 |
| KRH04166 | Soybean | nucleus | 28.77 | 41.62 |
| KRH12516 | Soybean | nucleus | 25.96 | 40.88 |
| TraesCS4D01G319700.1 | Wheat | nucleus | 34.74 | 40.74 |
| TraesCS5A01G495500.1 | Wheat | nucleus | 34.39 | 40.5 |
| TraesCS7D01G166500.1 | Wheat | nucleus | 35.79 | 40.48 |
| TraesCS4B01G323300.1 | Wheat | nucleus | 34.74 | 40.41 |
| TraesCS7B01G070400.1 | Wheat | nucleus | 35.79 | 40.16 |
| KRH73023 | Soybean | nucleus | 30.88 | 40.0 |
| CDX84119 | Canola | nucleus | 36.49 | 39.85 |
| TraesCS4D01G224500.1 | Wheat | nucleus | 31.93 | 39.39 |
| VIT_04s0008g01840.t01 | Wine grape | nucleus | 30.88 | 38.94 |
| Bra035532.1-P | Field mustard | nucleus | 35.44 | 38.85 |
| KRH51400 | Soybean | nucleus | 31.93 | 38.72 |
| CDY49363 | Canola | nucleus | 35.44 | 38.7 |
| KRH29280 | Soybean | nucleus | 33.33 | 38.62 |
| KRH15114 | Soybean | nucleus | 25.26 | 38.5 |
| VIT_04s0008g01810.t01 | Wine grape | nucleus | 37.19 | 38.41 |
| TraesCS7A01G165700.1 | Wheat | nucleus | 35.09 | 38.17 |
| KRG89277 | Soybean | nucleus | 29.82 | 38.12 |
| Zm00001d037118_P001 | Maize | nucleus | 36.49 | 38.1 |
| HORVU4Hr1G063760.1 | Barley | nucleus | 30.53 | 37.66 |
| KRH24301 | Soybean | nucleus | 33.33 | 37.55 |
| Zm00001d044975_P001 | Maize | nucleus | 35.79 | 37.5 |
| EER92144 | Sorghum | nucleus | 38.6 | 37.41 |
| HORVU7Hr1G034630.1 | Barley | nucleus | 35.09 | 37.31 |
| HORVU4Hr1G082610.1 | Barley | nucleus | 33.68 | 36.64 |
| KRH50345 | Soybean | nucleus | 29.47 | 36.36 |
| KRH41018 | Soybean | nucleus | 27.37 | 35.78 |
| KRG91990 | Soybean | nucleus | 34.04 | 35.4 |
| KRH47591 | Soybean | nucleus | 32.63 | 35.09 |
| KRH34790 | Soybean | nucleus | 33.68 | 35.04 |
| Solyc12g049300.1.1 | Tomato | nucleus | 43.16 | 34.94 |
| KRH34791 | Soybean | nucleus | 33.33 | 34.8 |
| KRG91991 | Soybean | nucleus | 32.98 | 34.56 |
| GSMUA_Achr7P18560_001 | Banana | nucleus | 32.28 | 34.2 |
| KRH06175 | Soybean | nucleus | 31.93 | 33.83 |
| GSMUA_Achr7P18550_001 | Banana | nucleus | 31.23 | 33.71 |
| KRH54016 | Soybean | nucleus | 35.44 | 33.55 |
| AT5G35550.2 | Thale cress | nucleus | 30.53 | 33.33 |
| KRH63931 | Soybean | nucleus | 35.09 | 33.11 |
| KRH47884 | Soybean | nucleus | 33.68 | 33.1 |
| KRG97208 | Soybean | nucleus | 32.63 | 33.1 |
| KRH06443 | Soybean | nucleus | 32.98 | 32.08 |
| VIT_04s0008g01830.t01 | Wine grape | nucleus | 30.88 | 31.21 |
| KRH68929 | Soybean | nucleus | 25.26 | 29.39 |
| KRH11988 | Soybean | nucleus | 33.68 | 29.09 |
| KRH50769 | Soybean | nucleus | 32.98 | 27.89 |
| KRH37017 | Soybean | nucleus | 32.63 | 27.84 |
| KRH02323 | Soybean | nucleus | 33.68 | 27.43 |
| KRH31822 | Soybean | nucleus | 30.88 | 25.73 |
| GSMUA_Achr6P02530_001 | Banana | nucleus | 32.28 | 25.48 |
| KRH69237 | Soybean | nucleus | 32.63 | 25.07 |
| KRH17997 | Soybean | nucleus, plastid | 30.53 | 24.58 |
| KRH16413 | Soybean | nucleus | 30.53 | 24.1 |
| KRG96503 | Soybean | nucleus | 29.47 | 23.73 |
| KRH68241 | Soybean | nucleus | 29.47 | 23.4 |
| PGSC0003DMT400030322 | Potato | nucleus | 4.21 | 7.32 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100809225 | MapMan:15.5.2.1 | EMBL:ACUP02009816 | EnsemblPlantsGene:GLYMA_16G007200 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7MEG8 | EnsemblPlants:KRH06177 | ProteinID:KRH06177 |
| ProteinID:KRH06177.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF459 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000233B63F | : | : |
Description
hypothetical protein
Coordinates
chr16:+:594725..596329
Molecular Weight (calculated)
32466.4 Da
IEP (calculated)
7.765
GRAVY (calculated)
-0.687
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSRCCSKE GLNKGAWTAL EDRILTEYIN IHGEGKWRHL PKRAGLKRCG KSCRLRWLNY LRPGIKRGNI TNDEEELIIR LHNLLGNRWS LIAGRLPGRT
101: DNEIKNYWNT NIGRKLQNGG AGTTLNTLQQ EDQNVKEQEW HYDKGSCLVQ TKATRWTKVT VTNEISQPNE GITIKSNVGD NKMKGFLVSP SKESNNDSVL
201: LDFMADFEMD GNFFSELLKM DLPESSCKEN KILGDNGNPS TVDKVYLSPK SSCDTAHFPW GDSFYDTNFD FLPVTIFMES GFDWL
101: DNEIKNYWNT NIGRKLQNGG AGTTLNTLQQ EDQNVKEQEW HYDKGSCLVQ TKATRWTKVT VTNEISQPNE GITIKSNVGD NKMKGFLVSP SKESNNDSVL
201: LDFMADFEMD GNFFSELLKM DLPESSCKEN KILGDNGNPS TVDKVYLSPK SSCDTAHFPW GDSFYDTNFD FLPVTIFMES GFDWL
001: MGKRATTSVR REELNRGAWT DHEDKILRDY ITTHGEGKWS TLPNQAGLKR CGKSCRLRWK NYLRPGIKRG NISSDEEELI IRLHNLLGNR WSLIAGRLPG
101: RTDNEIKNHW NSNLRKRLPK TQTKQPKRIK HSTNNENNVC VIRTKAIRCS KTLLFSDLSL QKKSSTSPLP LKEQEMDQGG SSLMGDLEFD FDRIHSEFHF
201: PDLMDFDGLD CGNVTSLVSS NEILGELVPA QGNLDLNRPF TSCHHRGDDE DWLRDFTC
101: RTDNEIKNHW NSNLRKRLPK TQTKQPKRIK HSTNNENNVC VIRTKAIRCS KTLLFSDLSL QKKSSTSPLP LKEQEMDQGG SSLMGDLEFD FDRIHSEFHF
201: PDLMDFDGLD CGNVTSLVSS NEILGELVPA QGNLDLNRPF TSCHHRGDDE DWLRDFTC
Arabidopsis Description
TT2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT5G35550]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.