Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5A01G495500.1 | Wheat | nucleus | 89.39 | 90.5 |
TraesCS4D01G319700.1 | Wheat | nucleus | 85.31 | 86.01 |
TraesCS4D01G319800.1 | Wheat | nucleus | 77.55 | 84.82 |
HORVU4Hr1G082610.1 | Barley | nucleus | 81.22 | 75.95 |
TraesCS7B01G070400.1 | Wheat | nucleus | 71.84 | 69.29 |
Zm00001d044975_P001 | Maize | nucleus | 61.63 | 55.51 |
Zm00001d037118_P001 | Maize | nucleus | 61.63 | 55.31 |
TraesCS3B01G515900.1 | Wheat | nucleus | 40.41 | 48.53 |
GSMUA_Achr9P27380_001 | Banana | nucleus | 45.71 | 43.08 |
GSMUA_Achr6P04400_001 | Banana | nucleus | 48.16 | 42.91 |
VIT_11s0016g01310.t01 | Wine grape | nucleus | 37.96 | 42.27 |
TraesCS7B01G169900.1 | Wheat | nucleus | 35.1 | 36.6 |
KRH19274 | Soybean | nucleus | 43.27 | 34.87 |
KRH02634 | Soybean | nucleus | 43.67 | 34.85 |
KRH06177 | Soybean | nucleus | 40.41 | 34.74 |
VIT_11s0016g01320.t01 | Wine grape | nucleus | 40.0 | 34.51 |
CDX84119 | Canola | nucleus | 36.73 | 34.48 |
TraesCS1B01G279400.1 | Wheat | nucleus | 34.29 | 34.01 |
Bra035532.1-P | Field mustard | nucleus | 35.92 | 33.85 |
CDY49363 | Canola | nucleus | 35.92 | 33.72 |
KRH47594 | Soybean | nucleus | 37.14 | 33.21 |
TraesCS3B01G416400.1 | Wheat | nucleus | 35.1 | 32.21 |
TraesCS5B01G330100.1 | Wheat | nucleus | 33.47 | 31.18 |
TraesCS5B01G119300.1 | Wheat | nucleus | 34.29 | 30.88 |
TraesCS3B01G290600.1 | Wheat | nucleus | 32.65 | 29.41 |
AT5G35550.2 | Thale cress | nucleus | 31.02 | 29.12 |
Solyc12g049300.1.1 | Tomato | nucleus | 39.59 | 27.56 |
TraesCS4B01G186000.1 | Wheat | nucleus | 35.51 | 25.14 |
TraesCS1B01G005200.1 | Wheat | nucleus | 33.88 | 25.0 |
TraesCS1B01G023400.1 | Wheat | nucleus | 31.84 | 24.3 |
TraesCS1B01G049700.1 | Wheat | nucleus | 31.43 | 23.99 |
TraesCS1B01G023500.1 | Wheat | nucleus | 31.43 | 23.99 |
TraesCS4B01G096500.1 | Wheat | nucleus, plastid | 33.47 | 21.52 |
PGSC0003DMT400030322 | Potato | nucleus | 1.63 | 2.44 |
Protein Annotations
EnsemblPlants:TraesCS4B01G323300.1 | EnsemblPlantsGene:TraesCS4B01G323300 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
PANTHER:PTHR10641:SF459 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:613753847..613754689
Molecular Weight (calculated)
26495.3 Da
IEP (calculated)
9.106
GRAVY (calculated)
-0.455
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMRTCSAKE GVKRGAWTSK EDQTLASYIK AHGEGRWKEV PLKAGLRRCG KSCRLRWLNY LRPSIKRGNI SDDDEELIVR LHRLLGNRWS LIAGRLPGRT
101: DNEIKNYWNS TLGRKALPAR LDTTRTVATP CPSASSGSST GASTAWLSSN CGDGTSAKAA GLLSSASVWV PKPVRCTGGL FLSRDAPPPP VMETRAVGGD
201: ADECSGSSLV ASSGGGDWMD DVRALASFLE SDEDWDWVKS LQMAY
101: DNEIKNYWNS TLGRKALPAR LDTTRTVATP CPSASSGSST GASTAWLSSN CGDGTSAKAA GLLSSASVWV PKPVRCTGGL FLSRDAPPPP VMETRAVGGD
201: ADECSGSSLV ASSGGGDWMD DVRALASFLE SDEDWDWVKS LQMAY
001: MGRSPCCEKE HMNKGAWTKE EDERLVSYIK SHGEGCWRSL PRAAGLLRCG KSCRLRWINY LRPDLKRGNF THDEDELIIK LHSLLGNKWS LIAARLPGRT
101: DNEIKNYWNT HIKRKLLSKG IDPATHRGIN EAKISDLKKT KDQIVKDVSF VTKFEETDKS GDQKQNKYIR NGLVCKEERV VVEEKIGPDL NLELRISPPW
201: QNQREISTCT ASRFYMENDM ECSSETVKCQ TENSSSISYS SIDISSSNVG YDFLGLKTRI LDFRSLEMK
101: DNEIKNYWNT HIKRKLLSKG IDPATHRGIN EAKISDLKKT KDQIVKDVSF VTKFEETDKS GDQKQNKYIR NGLVCKEERV VVEEKIGPDL NLELRISPPW
201: QNQREISTCT ASRFYMENDM ECSSETVKCQ TENSSSISYS SIDISSSNVG YDFLGLKTRI LDFRSLEMK
Arabidopsis Description
MYB7Transcription factor MYB7 [Source:UniProtKB/Swiss-Prot;Acc:Q42379]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.