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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G495500.1 Wheat nucleus 89.39 90.5
TraesCS4D01G319700.1 Wheat nucleus 85.31 86.01
TraesCS4D01G319800.1 Wheat nucleus 77.55 84.82
HORVU4Hr1G082610.1 Barley nucleus 81.22 75.95
TraesCS7B01G070400.1 Wheat nucleus 71.84 69.29
Zm00001d044975_P001 Maize nucleus 61.63 55.51
Zm00001d037118_P001 Maize nucleus 61.63 55.31
TraesCS3B01G515900.1 Wheat nucleus 40.41 48.53
GSMUA_Achr9P27380_001 Banana nucleus 45.71 43.08
GSMUA_Achr6P04400_001 Banana nucleus 48.16 42.91
VIT_11s0016g01310.t01 Wine grape nucleus 37.96 42.27
TraesCS7B01G169900.1 Wheat nucleus 35.1 36.6
KRH19274 Soybean nucleus 43.27 34.87
KRH02634 Soybean nucleus 43.67 34.85
KRH06177 Soybean nucleus 40.41 34.74
VIT_11s0016g01320.t01 Wine grape nucleus 40.0 34.51
CDX84119 Canola nucleus 36.73 34.48
TraesCS1B01G279400.1 Wheat nucleus 34.29 34.01
Bra035532.1-P Field mustard nucleus 35.92 33.85
CDY49363 Canola nucleus 35.92 33.72
KRH47594 Soybean nucleus 37.14 33.21
TraesCS3B01G416400.1 Wheat nucleus 35.1 32.21
TraesCS5B01G330100.1 Wheat nucleus 33.47 31.18
TraesCS5B01G119300.1 Wheat nucleus 34.29 30.88
TraesCS3B01G290600.1 Wheat nucleus 32.65 29.41
AT5G35550.2 Thale cress nucleus 31.02 29.12
Solyc12g049300.1.1 Tomato nucleus 39.59 27.56
TraesCS4B01G186000.1 Wheat nucleus 35.51 25.14
TraesCS1B01G005200.1 Wheat nucleus 33.88 25.0
TraesCS1B01G023400.1 Wheat nucleus 31.84 24.3
TraesCS1B01G049700.1 Wheat nucleus 31.43 23.99
TraesCS1B01G023500.1 Wheat nucleus 31.43 23.99
TraesCS4B01G096500.1 Wheat nucleus, plastid 33.47 21.52
PGSC0003DMT400030322 Potato nucleus 1.63 2.44
Protein Annotations
EnsemblPlants:TraesCS4B01G323300.1EnsemblPlantsGene:TraesCS4B01G323300Gene3D:1.10.10.60GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488InterPro:Homeobox-like_sfInterPro:IPR017930InterPro:Myb_domInterPro:SANT/MybPANTHER:PTHR10641
PANTHER:PTHR10641:SF459PFAM:PF00249PFscan:PS51294SEG:segSMART:SM00717SUPFAM:SSF46689
TIGR:cd00167MapMan:15.5.2.1::::
Description
No Description!
Coordinates
chr4B:-:613753847..613754689
Molecular Weight (calculated)
26495.3 Da
IEP (calculated)
9.106
GRAVY (calculated)
-0.455
Length
245 amino acids
Sequence
(BLAST)
001: MGMRTCSAKE GVKRGAWTSK EDQTLASYIK AHGEGRWKEV PLKAGLRRCG KSCRLRWLNY LRPSIKRGNI SDDDEELIVR LHRLLGNRWS LIAGRLPGRT
101: DNEIKNYWNS TLGRKALPAR LDTTRTVATP CPSASSGSST GASTAWLSSN CGDGTSAKAA GLLSSASVWV PKPVRCTGGL FLSRDAPPPP VMETRAVGGD
201: ADECSGSSLV ASSGGGDWMD DVRALASFLE SDEDWDWVKS LQMAY
Best Arabidopsis Sequence Match ( AT2G16720.1 )
(BLAST)
001: MGRSPCCEKE HMNKGAWTKE EDERLVSYIK SHGEGCWRSL PRAAGLLRCG KSCRLRWINY LRPDLKRGNF THDEDELIIK LHSLLGNKWS LIAARLPGRT
101: DNEIKNYWNT HIKRKLLSKG IDPATHRGIN EAKISDLKKT KDQIVKDVSF VTKFEETDKS GDQKQNKYIR NGLVCKEERV VVEEKIGPDL NLELRISPPW
201: QNQREISTCT ASRFYMENDM ECSSETVKCQ TENSSSISYS SIDISSSNVG YDFLGLKTRI LDFRSLEMK
Arabidopsis Description
MYB7Transcription factor MYB7 [Source:UniProtKB/Swiss-Prot;Acc:Q42379]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.