Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28905215
|
gfp PMID:
28905215
doi
The Key Laboratory of Plant Resources/Beijing Botanical Garden, Institute of Botany, The Chinese Academy of Sciences, Beijing, 100093, China., The Key Laboratory of Plant Resources/Beijing Botanical Garden, Institute of Botany, The Chinese Academy of Sciences, Beijing, 100093, China. yzhpang@ibcas.ac.cn., University of Chinese Academy of Sciences, Beijing, 100049, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19274 | Soybean | nucleus | 90.23 | 91.12 |
| VIT_11s0016g01300.t01 | Wine grape | nucleus | 54.07 | 55.15 |
| KRG94424 | Soybean | nucleus | 16.29 | 54.35 |
| TraesCS3B01G515900.1 | Wheat | nucleus | 33.88 | 50.98 |
| KRH77336 | Soybean | nucleus | 29.64 | 50.0 |
| KRH28144 | Soybean | nucleus | 29.32 | 49.18 |
| HORVU3Hr1G100500.1 | Barley | nucleus | 39.74 | 47.84 |
| KRH47594 | Soybean | nucleus | 42.35 | 47.45 |
| KRH06177 | Soybean | nucleus | 43.65 | 47.02 |
| TraesCS4D01G319800.1 | Wheat | nucleus | 34.2 | 46.88 |
| TraesCS7B01G070400.1 | Wheat | nucleus | 38.11 | 46.06 |
| TraesCS7D01G166500.1 | Wheat | nucleus | 37.78 | 46.03 |
| TraesCS3D01G468400.1 | Wheat | nucleus | 39.41 | 45.66 |
| TraesCS4D01G319700.1 | Wheat | nucleus | 35.5 | 44.86 |
| KRH12516 | Soybean | nucleus | 26.38 | 44.75 |
| KRH04166 | Soybean | nucleus | 28.66 | 44.67 |
| KRH60702 | Soybean | nucleus | 30.29 | 44.29 |
| TraesCS5A01G495500.1 | Wheat | nucleus | 34.85 | 44.21 |
| TraesCS4B01G323300.1 | Wheat | nucleus | 34.85 | 43.67 |
| TraesCS4D01G224500.1 | Wheat | nucleus | 32.25 | 42.86 |
| HORVU7Hr1G034630.1 | Barley | nucleus | 36.81 | 42.16 |
| TraesCS7A01G165700.1 | Wheat | nucleus | 35.83 | 41.98 |
| HORVU4Hr1G063760.1 | Barley | nucleus | 30.62 | 40.69 |
| Zm00001d037118_P001 | Maize | nucleus | 36.16 | 40.66 |
| KRH51400 | Soybean | nucleus | 30.94 | 40.43 |
| CDX84119 | Canola | nucleus | 34.2 | 40.23 |
| KRH15114 | Soybean | nucleus | 24.43 | 40.11 |
| HORVU4Hr1G082610.1 | Barley | nucleus | 34.2 | 40.08 |
| KRH73023 | Soybean | nucleus | 28.66 | 40.0 |
| Bra035532.1-P | Field mustard | nucleus | 33.88 | 40.0 |
| CDY49363 | Canola | nucleus | 33.88 | 39.85 |
| Zm00001d044975_P001 | Maize | nucleus | 35.18 | 39.71 |
| EER92144 | Sorghum | nucleus | 37.78 | 39.46 |
| KRH34791 | Soybean | nucleus | 34.85 | 39.19 |
| KRG89277 | Soybean | nucleus | 28.34 | 39.01 |
| KRG91990 | Soybean | nucleus | 34.53 | 38.69 |
| KRH29280 | Soybean | nucleus | 30.94 | 38.62 |
| KRH50345 | Soybean | nucleus | 28.99 | 38.53 |
| KRG91991 | Soybean | nucleus | 33.88 | 38.24 |
| KRH24301 | Soybean | nucleus | 30.94 | 37.55 |
| KRH34790 | Soybean | nucleus | 33.22 | 37.23 |
| Solyc12g049300.1.1 | Tomato | nucleus | 41.69 | 36.36 |
| KRH41018 | Soybean | nucleus | 25.73 | 36.24 |
| GSMUA_Achr7P18550_001 | Banana | nucleus | 30.94 | 35.98 |
| GSMUA_Achr7P18560_001 | Banana | nucleus | 31.27 | 35.69 |
| KRH47591 | Soybean | nucleus | 30.62 | 35.47 |
| KRH06175 | Soybean | nucleus | 30.94 | 35.32 |
| AT5G35550.2 | Thale cress | nucleus | 29.97 | 35.25 |
| KRG97208 | Soybean | nucleus | 30.94 | 33.81 |
| KRH47884 | Soybean | nucleus | 31.92 | 33.79 |
| KRH06443 | Soybean | nucleus | 31.6 | 33.11 |
| KRH63931 | Soybean | nucleus | 30.29 | 30.79 |
| KRH54016 | Soybean | nucleus | 29.97 | 30.56 |
| KRH68929 | Soybean | nucleus | 23.78 | 29.8 |
| KRH50769 | Soybean | nucleus | 31.27 | 28.49 |
| KRH02323 | Soybean | nucleus | 32.25 | 28.29 |
| KRH11988 | Soybean | nucleus | 30.29 | 28.18 |
| KRH37017 | Soybean | nucleus | 30.62 | 28.14 |
| KRH31822 | Soybean | nucleus | 28.99 | 26.02 |
| KRH17997 | Soybean | nucleus, plastid | 29.97 | 25.99 |
| KRH16413 | Soybean | nucleus | 29.97 | 25.48 |
| GSMUA_Achr6P02530_001 | Banana | nucleus | 29.64 | 25.21 |
| KRH69237 | Soybean | nucleus | 29.97 | 24.8 |
| KRG96503 | Soybean | nucleus | 27.69 | 24.01 |
| KRH68241 | Soybean | nucleus | 27.36 | 23.4 |
| PGSC0003DMT400030322 | Potato | nucleus | 6.19 | 11.59 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100802704 | MapMan:15.5.2.1 | EMBL:ACUP02010312 | EnsemblPlantsGene:GLYMA_17G050500 | GO:GO:0000981 |
| GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:K7MK11 | EnsemblPlants:KRH02634 | ProteinID:KRH02634 |
| ProteinID:KRH02634.1 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF459 |
| InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000233DF77 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr17:-:3836046..3837793
Molecular Weight (calculated)
35146.1 Da
IEP (calculated)
6.598
GRAVY (calculated)
-0.879
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCSKE GLNRGAWTAH EDKILREYIR VHGEGRWRNL PKRAGLKRCG KSCRLRWLNY LRPDIKRGNI SPDEEELIIR LHKLLGNRWS LIAGRLPGRT
101: DNEIKNYWNT NLGKKVKDGH QTTTGNNTQN PMPNPSPSLS PPKLDSHVVR TKATKCSKLL FLNPPPHPSM QNKFKTEAEE EEEEARLVNG VIRNQMEHTT
201: YDNGFLSFPD EEKELSTDLL IDFNVGDFCL SDLLNSDFSN SYNFSCNINN VNNHEQLSPC SDQPDPMFSD EVLKDWTHNN FADEANASNN LRSFISFLES
301: TEERLGE
101: DNEIKNYWNT NLGKKVKDGH QTTTGNNTQN PMPNPSPSLS PPKLDSHVVR TKATKCSKLL FLNPPPHPSM QNKFKTEAEE EEEEARLVNG VIRNQMEHTT
201: YDNGFLSFPD EEKELSTDLL IDFNVGDFCL SDLLNSDFSN SYNFSCNINN VNNHEQLSPC SDQPDPMFSD EVLKDWTHNN FADEANASNN LRSFISFLES
301: TEERLGE
001: MGKRATTSVR REELNRGAWT DHEDKILRDY ITTHGEGKWS TLPNQAGLKR CGKSCRLRWK NYLRPGIKRG NISSDEEELI IRLHNLLGNR WSLIAGRLPG
101: RTDNEIKNHW NSNLRKRLPK TQTKQPKRIK HSTNNENNVC VIRTKAIRCS KTLLFSDLSL QKKSSTSPLP LKEQEMDQGG SSLMGDLEFD FDRIHSEFHF
201: PDLMDFDGLD CGNVTSLVSS NEILGELVPA QGNLDLNRPF TSCHHRGDDE DWLRDFTC
101: RTDNEIKNHW NSNLRKRLPK TQTKQPKRIK HSTNNENNVC VIRTKAIRCS KTLLFSDLSL QKKSSTSPLP LKEQEMDQGG SSLMGDLEFD FDRIHSEFHF
201: PDLMDFDGLD CGNVTSLVSS NEILGELVPA QGNLDLNRPF TSCHHRGDDE DWLRDFTC
Arabidopsis Description
TT2Duplicated homeodomain-like superfamily protein [Source:TAIR;Acc:AT5G35550]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.