Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G224500.1 | Wheat | nucleus | 77.92 | 77.92 |
| HORVU4Hr1G082610.1 | Barley | nucleus | 68.83 | 60.69 |
| HORVU7Hr1G034630.1 | Barley | nucleus | 64.94 | 55.97 |
| Zm00001d037118_P001 | Maize | nucleus | 56.71 | 47.99 |
| Zm00001d044975_P001 | Maize | nucleus | 56.28 | 47.79 |
| GSMUA_Achr9P27380_001 | Banana | nucleus | 41.13 | 36.54 |
| VIT_11s0016g01310.t01 | Wine grape | nucleus | 34.2 | 35.91 |
| GSMUA_Achr6P04400_001 | Banana | nucleus | 41.99 | 35.27 |
| HORVU7Hr1G057410.1 | Barley | nucleus | 35.5 | 34.45 |
| HORVU3Hr1G100500.1 | Barley | nucleus | 37.66 | 34.12 |
| KRH02634 | Soybean | nucleus | 40.69 | 30.62 |
| KRH06177 | Soybean | nucleus | 37.66 | 30.53 |
| KRH19274 | Soybean | nucleus | 39.83 | 30.26 |
| VIT_11s0016g01320.t01 | Wine grape | nucleus | 36.8 | 29.93 |
| Bra035532.1-P | Field mustard | nucleus | 33.33 | 29.62 |
| KRH47594 | Soybean | nucleus | 35.06 | 29.56 |
| CDY49363 | Canola | nucleus | 33.33 | 29.5 |
| CDX84119 | Canola | nucleus | 33.33 | 29.5 |
| HORVU1Hr1G074260.1 | Barley | nucleus | 31.6 | 29.08 |
| HORVU5Hr1G083910.2 | Barley | nucleus | 32.9 | 28.25 |
| HORVU5Hr1G036900.1 | Barley | nucleus | 32.03 | 28.03 |
| HORVU0Hr1G006810.2 | Barley | nucleus | 31.6 | 27.24 |
| HORVU3Hr1G082210.1 | Barley | nucleus | 31.6 | 27.04 |
| AT5G35550.2 | Thale cress | nucleus | 29.0 | 25.67 |
| Solyc12g049300.1.1 | Tomato | nucleus | 35.06 | 23.01 |
| HORVU4Hr1G054420.3 | Barley | nucleus | 32.47 | 22.06 |
| HORVU4Hr1G018360.2 | Barley | nucleus | 31.17 | 19.73 |
| PGSC0003DMT400030322 | Potato | nucleus | 2.16 | 3.05 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G063760.1 | EnsemblPlantsGene:HORVU4Hr1G063760 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF459 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI000B47EFD7 | UniProt:A0A287PCL2 | MapMan:15.5.2.1 | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:533783874..533785088
Molecular Weight (calculated)
25517.9 Da
IEP (calculated)
8.207
GRAVY (calculated)
-0.530
Length
231 amino acids
Sequence
(BLAST)
(BLAST)
001: AWTSKEDETL ASYVKAHGEG RWNEVPLRAG LRRCGKSCRL RWLNYLRPNV KRGNISNDEE EIIVRLHALL GNRWSIIAGR LPGRRDNEIK NYWNSTLSRK
101: VLPAPHSATR MVATPDTSAG SGCYTETSAA LSNCGPRTEA SAALPAALWA PKPVRYTGLP FFGRDKSLRS PVAETRTVAN GDNCSRSSSV TSEFPAIPPS
201: LDGGDWMDEV RALESFLESD EDWVNSVDMP L
101: VLPAPHSATR MVATPDTSAG SGCYTETSAA LSNCGPRTEA SAALPAALWA PKPVRYTGLP FFGRDKSLRS PVAETRTVAN GDNCSRSSSV TSEFPAIPPS
201: LDGGDWMDEV RALESFLESD EDWVNSVDMP L
001: MGRSPCCEKE HMNKGAWTKE EDERLVSYIK SHGEGCWRSL PRAAGLLRCG KSCRLRWINY LRPDLKRGNF THDEDELIIK LHSLLGNKWS LIAARLPGRT
101: DNEIKNYWNT HIKRKLLSKG IDPATHRGIN EAKISDLKKT KDQIVKDVSF VTKFEETDKS GDQKQNKYIR NGLVCKEERV VVEEKIGPDL NLELRISPPW
201: QNQREISTCT ASRFYMENDM ECSSETVKCQ TENSSSISYS SIDISSSNVG YDFLGLKTRI LDFRSLEMK
101: DNEIKNYWNT HIKRKLLSKG IDPATHRGIN EAKISDLKKT KDQIVKDVSF VTKFEETDKS GDQKQNKYIR NGLVCKEERV VVEEKIGPDL NLELRISPPW
201: QNQREISTCT ASRFYMENDM ECSSETVKCQ TENSSSISYS SIDISSSNVG YDFLGLKTRI LDFRSLEMK
Arabidopsis Description
MYB7Transcription factor MYB7 [Source:UniProtKB/Swiss-Prot;Acc:Q42379]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.