Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G186000.1 | Wheat | nucleus | 91.76 | 90.17 |
| TraesCS4D01G187100.1 | Wheat | nucleus | 90.88 | 89.31 |
| TraesCS4A01G118400.1 | Wheat | nucleus | 90.88 | 89.31 |
| KRG94424 | Soybean | nucleus | 18.53 | 68.48 |
| Zm00001d047671_P001 | Maize | nucleus | 59.12 | 58.43 |
| Zm00001d028842_P001 | Maize | nucleus | 55.0 | 55.82 |
| EER92385 | Sorghum | nucleus | 57.65 | 55.06 |
| GSMUA_AchrUn_... | Banana | nucleus | 39.71 | 42.19 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 43.24 | 39.62 |
| Solyc06g009710.2.1 | Tomato | nucleus | 33.53 | 38.38 |
| PGSC0003DMT400011167 | Potato | nucleus | 30.29 | 38.15 |
| HORVU7Hr1G057410.1 | Barley | nucleus | 26.18 | 37.4 |
| Solyc12g049350.1.1 | Tomato | nucleus | 31.76 | 36.86 |
| KRH31822 | Soybean | nucleus | 36.76 | 36.55 |
| PGSC0003DMT400018841 | Potato | nucleus | 32.35 | 36.3 |
| AT3G62610.1 | Thale cress | nucleus | 36.47 | 36.15 |
| HORVU3Hr1G100500.1 | Barley | nucleus | 26.76 | 35.69 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 38.24 | 35.42 |
| AT2G47460.1 | Thale cress | nucleus | 38.53 | 35.31 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 33.24 | 35.2 |
| Solyc01g079620.2.1 | Tomato | nucleus | 34.71 | 34.91 |
| HORVU1Hr1G074260.1 | Barley | nucleus | 25.59 | 34.66 |
| Bra036145.1-P | Field mustard | nucleus | 35.29 | 34.58 |
| HORVU5Hr1G083910.2 | Barley | nucleus | 27.35 | 34.57 |
| KRH69237 | Soybean | nucleus | 37.65 | 34.5 |
| Bra037419.1-P | Field mustard | nucleus | 34.71 | 34.4 |
| AT5G49330.1 | Thale cress | nucleus | 34.12 | 33.92 |
| PGSC0003DMT400023322 | Potato | nucleus | 36.18 | 33.88 |
| KRH11988 | Soybean | nucleus | 32.65 | 33.64 |
| KRG96503 | Soybean | nucleus | 34.71 | 33.33 |
| KRH68241 | Soybean | nucleus | 35.0 | 33.15 |
| HORVU3Hr1G082210.1 | Barley | nucleus | 26.18 | 32.96 |
| HORVU5Hr1G036900.1 | Barley | nucleus | 25.59 | 32.95 |
| KRH50769 | Soybean | nucleus | 32.65 | 32.94 |
| KRH37017 | Soybean | nucleus | 32.35 | 32.93 |
| HORVU4Hr1G063760.1 | Barley | nucleus | 22.06 | 32.47 |
| Bra000453.1-P | Field mustard | nucleus | 35.88 | 32.45 |
| HORVU7Hr1G034630.1 | Barley | nucleus | 25.0 | 31.72 |
| KRH02323 | Soybean | nucleus | 32.65 | 31.71 |
| HORVU4Hr1G082610.1 | Barley | nucleus | 23.82 | 30.92 |
| Bra004456.1-P | Field mustard | nucleus | 32.06 | 29.86 |
| HORVU0Hr1G006810.2 | Barley | nucleus | 23.24 | 29.48 |
| VIT_05s0077g01360.t01 | Wine grape | nucleus | 32.06 | 28.46 |
| HORVU4Hr1G018360.2 | Barley | nucleus | 26.18 | 24.38 |
| CDY27486 | Canola | plastid | 9.12 | 13.14 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EMBL:AK356334 | UniProt:F2CXI1 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:HORVU4Hr1G054420 | EnsemblPlants:HORVU4Hr1G054420.3 | InterPro:Homeobox-like_sf | InterPro:IPR017930 |
| InterPro:Myb-rel_proteinP_C | InterPro:Myb_dom | PFAM:PF00249 | PFAM:PF06640 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF203 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0002004D5C | SEG:seg |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CXI1]
Coordinates
chrchr4H:-:453962791..453967880
Molecular Weight (calculated)
37295.3 Da
IEP (calculated)
4.759
GRAVY (calculated)
-0.643
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKV GLKRGRWTAE EDDILANYIA QHGEGSWRSL PKNAGLLRCG KSCRLRWINY LRDGVRRGNI SKEEDDLIVK LHATLGNRWS LIASHLPGRT
101: DNEIKNYWNS HLSRQIHTFR RIYTTVRDTT ITVDIHKLSA AGKRRGGRTP GQSPKSSTKK KQPVPEPVTN AKGTSSTASS PPQSDEARSA VVDPDQNQPN
201: NSISVSNTSD GPCSEDGTWP MVMDPVVDQT DALEANCTVD QHQMGLWEVS NPMDQIGILE DESEVQALLS SSVTAESGID PGGLSQVDDL LDMDWEGFAS
301: NLWDQPAQNG LLQPAEPQVA TGSESDELES FVSWLLSDAC
101: DNEIKNYWNS HLSRQIHTFR RIYTTVRDTT ITVDIHKLSA AGKRRGGRTP GQSPKSSTKK KQPVPEPVTN AKGTSSTASS PPQSDEARSA VVDPDQNQPN
201: NSISVSNTSD GPCSEDGTWP MVMDPVVDQT DALEANCTVD QHQMGLWEVS NPMDQIGILE DESEVQALLS SSVTAESGID PGGLSQVDDL LDMDWEGFAS
301: NLWDQPAQNG LLQPAEPQVA TGSESDELES FVSWLLSDAC
001: MGRAPCCEKV GIKRGRWTAE EDQILSNYIQ SNGEGSWRSL PKNAGLKRCG KSCRLRWINY LRSDLKRGNI TPEEEELVVK LHSTLGNRWS LIAGHLPGRT
101: DNEIKNYWNS HLSRKLHNFI RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN ADVAGADKEA LMVESSGAEA
201: ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN
301: DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD DESALVAWLL S
101: DNEIKNYWNS HLSRKLHNFI RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN ADVAGADKEA LMVESSGAEA
201: ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN
301: DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD DESALVAWLL S
Arabidopsis Description
MYB12Transcription factor MYB12 [Source:UniProtKB/Swiss-Prot;Acc:O22264]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.