Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85403 | Canola | nucleus | 80.41 | 80.41 |
| CDX86237 | Canola | nucleus | 80.41 | 80.17 |
| Bra037419.1-P | Field mustard | nucleus | 80.41 | 80.17 |
| CDY49609 | Canola | nucleus | 79.24 | 77.65 |
| CDY00035 | Canola | nucleus | 74.85 | 77.58 |
| Bra036145.1-P | Field mustard | nucleus | 78.36 | 77.23 |
| CDY05636 | Canola | nucleus | 61.99 | 73.1 |
| AT1G35515.1 | Thale cress | nucleus | 26.02 | 41.98 |
| PGSC0003DMT400011167 | Potato | nucleus | 32.16 | 40.74 |
| AT4G09460.1 | Thale cress | nucleus | 26.61 | 38.56 |
| Os01t0305900-01 | Rice | nucleus | 35.38 | 38.17 |
| Solyc06g009710.2.1 | Tomato | nucleus | 33.04 | 38.05 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.38 | 37.81 |
| Solyc12g049350.1.1 | Tomato | nucleus | 31.58 | 36.86 |
| Solyc01g079620.2.1 | Tomato | nucleus | 36.26 | 36.69 |
| PGSC0003DMT400018841 | Potato | nucleus | 32.46 | 36.63 |
| AT3G62610.1 | Thale cress | nucleus | 36.55 | 36.44 |
| AT1G22640.1 | Thale cress | nucleus | 27.19 | 36.19 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 38.6 | 35.97 |
| AT5G14750.1 | Thale cress | nucleus | 21.34 | 35.96 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 38.89 | 35.85 |
| AT2G47460.1 | Thale cress | nucleus | 38.3 | 35.31 |
| TraesCS1B01G023400.1 | Wheat | nucleus | 32.75 | 34.89 |
| TraesCS1B01G023500.1 | Wheat | nucleus | 32.75 | 34.89 |
| TraesCS1D01G021700.1 | Wheat | nucleus | 31.87 | 34.71 |
| OQU86782 | Sorghum | nucleus | 36.55 | 34.63 |
| AT3G13540.1 | Thale cress | nucleus | 25.15 | 34.54 |
| TraesCS4B01G186000.1 | Wheat | nucleus | 34.8 | 34.39 |
| PGSC0003DMT400023322 | Potato | nucleus | 36.26 | 34.16 |
| HORVU4Hr1G054420.3 | Barley | nucleus | 33.92 | 34.12 |
| TraesCS4A01G118400.1 | Wheat | nucleus | 34.5 | 34.1 |
| TraesCS4D01G187100.1 | Wheat | nucleus | 34.5 | 34.1 |
| TraesCS1B01G049700.1 | Wheat | nucleus | 31.87 | 33.96 |
| AT2G16720.1 | Thale cress | nucleus | 26.32 | 33.46 |
| Zm00001d028842_P001 | Maize | nucleus | 32.75 | 33.43 |
| AT5G52600.1 | Thale cress | nucleus | 19.59 | 33.33 |
| Zm00001d040621_P002 | Maize | nucleus | 34.21 | 33.05 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 30.99 | 33.02 |
| AT5G40330.1 | Thale cress | nucleus | 21.05 | 32.88 |
| EER92385 | Sorghum | nucleus | 33.92 | 32.58 |
| TraesCS1B01G005200.1 | Wheat | nucleus | 31.58 | 32.53 |
| AT4G38620.1 | Thale cress | nucleus | 26.61 | 32.27 |
| Zm00001d047671_P001 | Maize | nucleus | 32.46 | 32.27 |
| TraesCS1D01G020900.1 | Wheat | nucleus | 31.29 | 31.56 |
| AT4G34990.1 | Thale cress | nucleus | 25.15 | 31.39 |
| TraesCS1A01G021500.1 | Wheat | nucleus | 30.7 | 31.16 |
| AT3G27920.1 | Thale cress | nucleus | 20.47 | 30.7 |
| AT5G35550.2 | Thale cress | nucleus | 19.59 | 25.67 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:834993 | ProteinID:AED95797.1 | EMBL:AF371977 | ArrayExpress:AT5G49330 |
| EnsemblPlantsGene:AT5G49330 | RefSeq:AT5G49330 | TAIR:AT5G49330 | RefSeq:AT5G49330-TAIR-G | EnsemblPlants:AT5G49330.1 | TAIR:AT5G49330.1 |
| EMBL:AY519634 | ProteinID:BAB10351.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006357 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009416 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010224 |
| GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045893 | GO:GO:0051555 | GO:GO:1900386 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | Symbol:MYB111 | InterPro:Myb_dom | RefSeq:NP_199744.1 | PFAM:PF00249 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0025022 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF203 | UniProt:Q9FJ07 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00000A812D |
| SEG:seg | : | : | : | : | : |
Description
MYB111Transcription factor MYB111 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ07]
Coordinates
chr5:-:19998823..20001572
Molecular Weight (calculated)
38482.8 Da
IEP (calculated)
4.955
GRAVY (calculated)
-0.733
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKI GLKRGRWTAE EDEILTKYIQ TNGEGSWRSL PKKAGLLRCG KSCRLRWINY LRRDLKRGNI TSDEEEIIVK LHSLLGNRWS LIATHLPGRT
101: DNEIKNYWNS HLSRKIYAFT AVSGDGHNLL VNDVVLKKSC SSSSGAKNNN KTKKKKKGRT SRSSMKKHKQ MVTASQCFSQ PKELESDFSE GGQNGNFEGE
201: SLGPYEWLDG ELERLLSSCV WECTSEEAVI GVNDEKVCES GDNSSCCVNL FEEEQGSETK IGHVGITEVD HDMTVERERE GSFLSSNSNE NNDKDWWVGL
301: CNSSEVGFGV DEELLDWEFQ GNVTCQSDDL WDLSDIGEIT LE
101: DNEIKNYWNS HLSRKIYAFT AVSGDGHNLL VNDVVLKKSC SSSSGAKNNN KTKKKKKGRT SRSSMKKHKQ MVTASQCFSQ PKELESDFSE GGQNGNFEGE
201: SLGPYEWLDG ELERLLSSCV WECTSEEAVI GVNDEKVCES GDNSSCCVNL FEEEQGSETK IGHVGITEVD HDMTVERERE GSFLSSNSNE NNDKDWWVGL
301: CNSSEVGFGV DEELLDWEFQ GNVTCQSDDL WDLSDIGEIT LE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.