Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d040621_P002 | Maize | nucleus | 78.67 | 80.23 |
| KRG94424 | Soybean | nucleus | 19.11 | 75.0 |
| Os01t0305900-01 | Rice | nucleus | 57.34 | 65.3 |
| EES16743 | Sorghum | nucleus | 27.15 | 45.58 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.73 | 40.31 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 41.0 | 39.89 |
| PGSC0003DMT400011167 | Potato | nucleus | 28.53 | 38.15 |
| EER99264 | Sorghum | nucleus | 27.42 | 37.5 |
| KRH69237 | Soybean | nucleus | 38.5 | 37.47 |
| KRH31822 | Soybean | nucleus | 35.46 | 37.43 |
| AT5G49330.1 | Thale cress | nucleus | 34.63 | 36.55 |
| Solyc06g009710.2.1 | Tomato | nucleus | 29.92 | 36.36 |
| EER92385 | Sorghum | nucleus | 35.73 | 36.24 |
| AT3G62610.1 | Thale cress | nucleus | 34.35 | 36.15 |
| EES01839 | Sorghum | nucleus | 26.87 | 36.06 |
| Bra037419.1-P | Field mustard | nucleus | 34.07 | 35.86 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 36.29 | 35.69 |
| EES14116 | Sorghum | nucleus | 25.48 | 35.66 |
| KXG22070 | Sorghum | nucleus | 25.76 | 35.5 |
| Solyc12g049350.1.1 | Tomato | nucleus | 28.25 | 34.81 |
| AT2G47460.1 | Thale cress | nucleus | 35.73 | 34.77 |
| PGSC0003DMT400018841 | Potato | nucleus | 29.09 | 34.65 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 30.75 | 34.58 |
| Bra036145.1-P | Field mustard | nucleus | 32.96 | 34.29 |
| KRH11988 | Soybean | nucleus | 31.02 | 33.94 |
| KRH50769 | Soybean | nucleus | 31.58 | 33.83 |
| KRH68241 | Soybean | nucleus | 33.52 | 33.7 |
| KRH37017 | Soybean | nucleus | 31.02 | 33.53 |
| KRH02323 | Soybean | nucleus | 32.41 | 33.43 |
| OQU78830 | Sorghum | nucleus | 26.04 | 33.33 |
| KRG96503 | Soybean | nucleus | 32.69 | 33.33 |
| Solyc01g079620.2.1 | Tomato | nucleus | 30.75 | 32.84 |
| PGSC0003DMT400023322 | Potato | nucleus | 32.96 | 32.78 |
| KXG33190 | Sorghum | nucleus | 24.65 | 31.79 |
| Bra000453.1-P | Field mustard | nucleus | 32.41 | 31.12 |
| VIT_05s0077g01360.t01 | Wine grape | nucleus | 32.69 | 30.81 |
| Bra004456.1-P | Field mustard | nucleus | 30.19 | 29.86 |
| OQU83016 | Sorghum | nucleus | 26.04 | 29.84 |
| EER92144 | Sorghum | nucleus | 23.82 | 29.25 |
| CDY27486 | Canola | plastid | 7.48 | 11.44 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:8060330 | UniProt:A0A1W0VXD0 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| EnsemblPlants:OQU86782 | ProteinID:OQU86782 | ProteinID:OQU86782.1 | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF595 | InterPro:SANT/Myb | SMART:SM00717 | EnsemblPlantsGene:SORBI_3003G145100 | SUPFAM:SSF46689 | UniParc:UPI0001A8444C |
| RefSeq:XP_002455521.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:14937319..14942487
Molecular Weight (calculated)
39214.3 Da
IEP (calculated)
4.380
GRAVY (calculated)
-0.826
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKV GLKKGRWTKE EDEILARYIK EHGEGSWRSL PKNAGLLRCG KSCRLRWINY LRADLKRGNI TEEEEEMIIK LHATLGNRWS LIAGHLPGRT
101: DNEIKNYWNS HLSRRATDFH DGVVVNIDLS KLPGGGKRRG GRASRGIVAA AAKEKKAKGK AKEKDDKGKN KVAAEAEQQQ QLKDDKEEEE DDDANVSTTP
201: RPPQSDCAAA AAQSEEQAQA SASGLTSDNG PEEEEEEDTL ALSEELVSAL LASPGSPKLE VGPDGSCMDS DSGPSGDSCG GPGGGPYGDV AQDLDLDDNA
301: IMDWDLMGLD ISAADDMWDP LMWDYDDQTL GVPEPEGGGV GHHQQPQQDE VMSDLFFLDN L
101: DNEIKNYWNS HLSRRATDFH DGVVVNIDLS KLPGGGKRRG GRASRGIVAA AAKEKKAKGK AKEKDDKGKN KVAAEAEQQQ QLKDDKEEEE DDDANVSTTP
201: RPPQSDCAAA AAQSEEQAQA SASGLTSDNG PEEEEEEDTL ALSEELVSAL LASPGSPKLE VGPDGSCMDS DSGPSGDSCG GPGGGPYGDV AQDLDLDDNA
301: IMDWDLMGLD ISAADDMWDP LMWDYDDQTL GVPEPEGGGV GHHQQPQQDE VMSDLFFLDN L
001: MGRAPCCEKV GIKRGRWTAE EDQILSNYIQ SNGEGSWRSL PKNAGLKRCG KSCRLRWINY LRSDLKRGNI TPEEEELVVK LHSTLGNRWS LIAGHLPGRT
101: DNEIKNYWNS HLSRKLHNFI RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN ADVAGADKEA LMVESSGAEA
201: ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN
301: DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD DESALVAWLL S
101: DNEIKNYWNS HLSRKLHNFI RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN ADVAGADKEA LMVESSGAEA
201: ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN
301: DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD DESALVAWLL S
Arabidopsis Description
MYB12Transcription factor MYB12 [Source:UniProtKB/Swiss-Prot;Acc:O22264]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.