Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| OQU88697 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G38620.1 | OQU88697 | AT4G09820.1 | 15361138 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d032024_P001 | Maize | nucleus | 85.27 | 86.61 |
| Zm00001d053220_P001 | Maize | nucleus | 81.78 | 81.15 |
| GSMUA_Achr1P02420_001 | Banana | nucleus | 56.2 | 74.36 |
| TraesCS7A01G272100.1 | Wheat | nucleus | 68.6 | 73.75 |
| TraesCS7B01G169900.1 | Wheat | nucleus | 67.05 | 73.62 |
| HORVU7Hr1G057410.1 | Barley | nucleus | 67.83 | 73.53 |
| TraesCS7D01G272400.1 | Wheat | nucleus | 66.67 | 73.5 |
| KRH60702 | Soybean | nucleus | 58.53 | 71.9 |
| VIT_03s0038g02310.t01 | Wine grape | nucleus | 65.5 | 67.33 |
| EER99264 | Sorghum | nucleus | 67.44 | 65.91 |
| KRH51400 | Soybean | nucleus | 58.14 | 63.83 |
| KRH29280 | Soybean | nucleus | 60.85 | 63.82 |
| Solyc01g111500.2.1 | Tomato | nucleus | 62.02 | 63.49 |
| PGSC0003DMT400015803 | Potato | nucleus | 62.02 | 62.99 |
| KRH24301 | Soybean | nucleus | 60.47 | 61.66 |
| Solyc10g055410.1.1 | Tomato | nucleus | 63.18 | 59.71 |
| PGSC0003DMT400034372 | Potato | nucleus | 61.63 | 59.33 |
| EES16743 | Sorghum | nucleus | 48.45 | 58.14 |
| GSMUA_Achr4P25710_001 | Banana | nucleus | 41.86 | 56.25 |
| KXG22070 | Sorghum | nucleus | 55.43 | 54.58 |
| AT4G38620.1 | Thale cress | nucleus | 58.14 | 53.19 |
| CDX90285 | Canola | nucleus | 58.14 | 53.0 |
| Bra010736.1-P | Field mustard | nucleus | 57.75 | 52.65 |
| EES01839 | Sorghum | nucleus | 54.26 | 52.04 |
| CDY22416 | Canola | nucleus | 57.75 | 50.68 |
| CDX72743 | Canola | nucleus | 57.75 | 50.68 |
| Bra033572.1-P | Field mustard | nucleus | 57.75 | 50.68 |
| CDY52797 | Canola | nucleus | 49.61 | 49.61 |
| CDY12092 | Canola | nucleus | 57.75 | 49.01 |
| OQU78830 | Sorghum | nucleus | 47.67 | 43.62 |
| OQU83016 | Sorghum | nucleus | 52.33 | 42.86 |
| KXG33190 | Sorghum | nucleus | 35.27 | 32.5 |
| EER92144 | Sorghum | nucleus | 35.66 | 31.29 |
| OQU86782 | Sorghum | nucleus | 35.66 | 25.48 |
| EER92385 | Sorghum | nucleus | 32.95 | 23.88 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | EntrezGene:8057846 | UniProt:C5YH31 | EnsemblPlants:EES14116 | ProteinID:EES14116 |
| ProteinID:EES14116.1 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom |
| PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF741 | InterPro:SANT/Myb | SMART:SM00717 |
| EnsemblPlantsGene:SORBI_3007G177100 | SUPFAM:SSF46689 | unigene:Sbi.8066 | UniParc:UPI0001A87C40 | RefSeq:XP_002444621.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr7:+:61085887..61087423
Molecular Weight (calculated)
28336.3 Da
IEP (calculated)
9.451
GRAVY (calculated)
-0.405
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKA HTNKGAWTKE EDDRLVAYIR AHGEGCWRSL PKAAGLMRCG KSCRLRWINY LRPDLKRGNF TADEDDLIIK LHSLLGNKWS LIAARLPGRT
101: DNEIKNYWNT HIRRKLLGRG IDPVTHRPIA DAGAGTVTTI SFQPNKPNAA VAAQAPQHQP IKAVATAVVK VPRCPDLNLD LCISPPCQQK EDEELDLKPA
201: VVVKREVLQA GHGGSLCFGC SLGIQKGAPG CSCSSSNSHH RFLGLRSGML DFRGLEMK
101: DNEIKNYWNT HIRRKLLGRG IDPVTHRPIA DAGAGTVTTI SFQPNKPNAA VAAQAPQHQP IKAVATAVVK VPRCPDLNLD LCISPPCQQK EDEELDLKPA
201: VVVKREVLQA GHGGSLCFGC SLGIQKGAPG CSCSSSNSHH RFLGLRSGML DFRGLEMK
001: MGRSPCCEKD HTNKGAWTKE EDDKLISYIK AHGEGCWRSL PRSAGLQRCG KSCRLRWINY LRPDLKRGNF TLEEDDLIIK LHSLLGNKWS LIATRLPGRT
101: DNEIKNYWNT HVKRKLLRKG IDPATHRPIN ETKTSQDSSD SSKTEDPLVK ILSFGPQLEK IANFGDERIQ KRVEYSVVEE RCLDLNLELR ISPPWQDKLH
201: DERNLRFGRV KYRCSACRFG FGNGKECSCN NVKCQTEDSS SSSYSSTDIS SSIGYDFLGL NNTRVLDFST LEMK
101: DNEIKNYWNT HVKRKLLRKG IDPATHRPIN ETKTSQDSSD SSKTEDPLVK ILSFGPQLEK IANFGDERIQ KRVEYSVVEE RCLDLNLELR ISPPWQDKLH
201: DERNLRFGRV KYRCSACRFG FGNGKECSCN NVKCQTEDSS SSSYSSTDIS SSIGYDFLGL NNTRVLDFST LEMK
Arabidopsis Description
MYB32Transcription factor MYB32 [Source:UniProtKB/Swiss-Prot;Acc:O49608]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.