Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G169900.1 | Wheat | nucleus | 93.33 | 95.32 |
| TraesCS7D01G272400.1 | Wheat | nucleus | 92.08 | 94.44 |
| HORVU7Hr1G057410.1 | Barley | nucleus | 91.67 | 92.44 |
| Zm00001d032024_P001 | Maize | nucleus | 74.58 | 70.47 |
| GSMUA_Achr1P02420_001 | Banana | nucleus | 55.83 | 68.72 |
| EES14116 | Sorghum | nucleus | 73.75 | 68.6 |
| KRH60702 | Soybean | nucleus | 58.75 | 67.14 |
| Zm00001d053220_P001 | Maize | nucleus | 72.5 | 66.92 |
| KRH51400 | Soybean | nucleus | 61.25 | 62.55 |
| VIT_03s0038g02310.t01 | Wine grape | nucleus | 64.58 | 61.75 |
| KRH29280 | Soybean | nucleus | 60.83 | 59.35 |
| PGSC0003DMT400015803 | Potato | nucleus | 62.5 | 59.06 |
| Solyc01g111500.2.1 | Tomato | nucleus | 61.67 | 58.73 |
| TraesCS5A01G329900.1 | Wheat | nucleus | 64.17 | 57.46 |
| KRH24301 | Soybean | nucleus | 60.42 | 57.31 |
| GSMUA_Achr4P25710_001 | Banana | nucleus | 44.17 | 55.21 |
| TraesCS1A01G268800.1 | Wheat | nucleus | 56.25 | 54.66 |
| PGSC0003DMT400034372 | Potato | nucleus | 60.83 | 54.48 |
| Solyc10g055410.1.1 | Tomato | nucleus | 61.67 | 54.21 |
| TraesCS5A01G111300.1 | Wheat | nucleus | 53.33 | 52.46 |
| CDX90285 | Canola | nucleus | 61.25 | 51.94 |
| Bra010736.1-P | Field mustard | nucleus | 61.25 | 51.94 |
| AT4G38620.1 | Thale cress | nucleus | 60.42 | 51.42 |
| TraesCS3A01G384400.1 | Wheat | nucleus | 57.08 | 51.31 |
| CDY22416 | Canola | nucleus | 60.0 | 48.98 |
| CDX72743 | Canola | nucleus | 60.0 | 48.98 |
| Bra033572.1-P | Field mustard | nucleus | 60.0 | 48.98 |
| CDY52797 | Canola | nucleus | 52.08 | 48.45 |
| CDY12092 | Canola | nucleus | 60.42 | 47.7 |
| TraesCS4A01G217800.1 | Wheat | nucleus | 53.33 | 44.44 |
| TraesCS5A01G495500.1 | Wheat | nucleus | 35.0 | 34.71 |
| TraesCS3A01G257800.1 | Wheat | nucleus | 37.92 | 34.34 |
| TraesCS7A01G165700.1 | Wheat | nucleus | 37.08 | 33.97 |
| TraesCS1A01G021500.1 | Wheat | nucleus | 36.25 | 25.82 |
| TraesCS4A01G118400.1 | Wheat | nucleus | 37.08 | 25.72 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G272100.1 | EnsemblPlantsGene:TraesCS7A01G272100 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF741 | PFAM:PF00249 | PFscan:PS51294 | SMART:SM00717 | SUPFAM:SSF46689 | TIGR:cd00167 |
| MapMan:15.5.2.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:-:285575873..285576714
Molecular Weight (calculated)
26839.5 Da
IEP (calculated)
9.940
GRAVY (calculated)
-0.526
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKA HTNKGAWTRE EDERLVAHVR AHGEGCWRSL PGAAGLLRCG KSCRLRWINY LRPDLKRGNF TRDEDDLIVK LHSLLGNKWS LIAARLPGRT
101: DNEIKNYWNT HIRRKLLGRG IDPVTHRPLT HAASATTVSF LHPAEPPKTQ PATELSKPPR CPDLNLDLCI SLPFQQEEER PPARACAKPV KMEQLQQGGG
201: GLCFRCSILR VRGAATECSC GSNFLGLRAG MLDFRGLRMK
101: DNEIKNYWNT HIRRKLLGRG IDPVTHRPLT HAASATTVSF LHPAEPPKTQ PATELSKPPR CPDLNLDLCI SLPFQQEEER PPARACAKPV KMEQLQQGGG
201: GLCFRCSILR VRGAATECSC GSNFLGLRAG MLDFRGLRMK
001: MGRSPCCEKE HMNKGAWTKE EDERLVSYIK SHGEGCWRSL PRAAGLLRCG KSCRLRWINY LRPDLKRGNF THDEDELIIK LHSLLGNKWS LIAARLPGRT
101: DNEIKNYWNT HIKRKLLSKG IDPATHRGIN EAKISDLKKT KDQIVKDVSF VTKFEETDKS GDQKQNKYIR NGLVCKEERV VVEEKIGPDL NLELRISPPW
201: QNQREISTCT ASRFYMENDM ECSSETVKCQ TENSSSISYS SIDISSSNVG YDFLGLKTRI LDFRSLEMK
101: DNEIKNYWNT HIKRKLLSKG IDPATHRGIN EAKISDLKKT KDQIVKDVSF VTKFEETDKS GDQKQNKYIR NGLVCKEERV VVEEKIGPDL NLELRISPPW
201: QNQREISTCT ASRFYMENDM ECSSETVKCQ TENSSSISYS SIDISSSNVG YDFLGLKTRI LDFRSLEMK
Arabidopsis Description
MYB7Transcription factor MYB7 [Source:UniProtKB/Swiss-Prot;Acc:Q42379]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.