Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_17s0000g02650.t01 | Wine grape | nucleus | 21.67 | 50.3 |
| VIT_01s0011g04760.t01 | Wine grape | nucleus | 25.59 | 43.56 |
| VIT_04s0023g03710.t01 | Wine grape | nucleus | 27.42 | 43.39 |
| VIT_03s0038g02310.t01 | Wine grape | nucleus | 27.15 | 41.43 |
| VIT_14s0006g01620.t01 | Wine grape | nucleus | 24.02 | 40.35 |
| VIT_04s0008g01870.t01 | Wine grape | nucleus | 20.63 | 40.1 |
| VIT_17s0000g02660.t01 | Wine grape | nucleus | 23.5 | 39.3 |
| VIT_11s0016g01310.t01 | Wine grape | nucleus | 21.67 | 37.73 |
| VIT_09s0002g01380.t01 | Wine grape | nucleus | 19.84 | 37.44 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.07 | 37.19 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 27.68 | 36.55 |
| VIT_18s0117g00200.t01 | Wine grape | nucleus | 22.19 | 36.48 |
| TraesCS1D01G021700.1 | Wheat | nucleus | 29.77 | 36.31 |
| VIT_04s0008g01800.t01 | Wine grape | nucleus | 24.54 | 35.47 |
| Os01t0305900-01 | Rice | nucleus | 29.24 | 35.33 |
| VIT_18s0117g00210.t01 | Wine grape | nucleus | 23.76 | 35.27 |
| VIT_15s0046g00170.t01 | Wine grape | nucleus | 26.11 | 34.97 |
| TraesCS1B01G023400.1 | Wheat | nucleus | 29.24 | 34.89 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 29.24 | 34.89 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 33.68 | 34.77 |
| VIT_13s0084g00530.t01 | Wine grape | nucleus | 23.76 | 34.6 |
| TraesCS1B01G023500.1 | Wheat | nucleus | 28.98 | 34.58 |
| TraesCS1B01G005200.1 | Wheat | nucleus | 29.77 | 34.34 |
| TraesCS1B01G049700.1 | Wheat | nucleus | 28.72 | 34.27 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 32.64 | 34.06 |
| KRH50769 | Soybean | nucleus | 29.77 | 33.83 |
| KRH37017 | Soybean | nucleus | 29.24 | 33.53 |
| AT3G62610.1 | Thale cress | nucleus | 30.03 | 33.53 |
| AT2G47460.1 | Thale cress | nucleus | 32.11 | 33.15 |
| KRH11988 | Soybean | nucleus | 28.46 | 33.03 |
| VIT_04s0008g01840.t01 | Wine grape | nucleus | 19.32 | 32.74 |
| VIT_11s0016g05660.t01 | Wine grape | nucleus | 19.06 | 32.74 |
| OQU86782 | Sorghum | nucleus | 30.81 | 32.69 |
| TraesCS1A01G021500.1 | Wheat | nucleus | 28.72 | 32.64 |
| CDY55384 | Canola | nucleus | 25.07 | 32.54 |
| TraesCS4A01G118400.1 | Wheat | nucleus | 29.24 | 32.37 |
| KRH02323 | Soybean | nucleus | 29.5 | 32.29 |
| VIT_11s0016g01300.t01 | Wine grape | nucleus | 25.33 | 32.23 |
| Zm00001d040621_P002 | Maize | nucleus | 29.77 | 32.2 |
| CDX83327 | Canola | nucleus | 29.5 | 32.1 |
| TraesCS4B01G186000.1 | Wheat | nucleus | 28.98 | 32.08 |
| HORVU4Hr1G054420.3 | Barley | nucleus | 28.46 | 32.06 |
| VIT_04s0008g01810.t01 | Wine grape | nucleus | 22.98 | 31.88 |
| TraesCS1D01G020900.1 | Wheat | nucleus | 28.2 | 31.86 |
| VIT_11s0016g05690.t01 | Wine grape | nucleus | 18.54 | 31.84 |
| VIT_14s0066g01220.t01 | Wine grape | nucleus | 18.02 | 31.8 |
| CDX95725 | Canola | nucleus | 29.24 | 31.73 |
| VIT_11s0016g01320.t01 | Wine grape | nucleus | 23.5 | 31.69 |
| TraesCS4D01G187100.1 | Wheat | nucleus | 28.46 | 31.5 |
| Zm00001d047671_P001 | Maize | nucleus | 28.2 | 31.4 |
| VIT_01s0127g00730.t01 | Wine grape | nucleus | 18.02 | 31.36 |
| Bra000453.1-P | Field mustard | nucleus | 30.03 | 30.59 |
| Zm00001d028842_P001 | Maize | nucleus | 26.63 | 30.45 |
| EER92385 | Sorghum | nucleus | 28.2 | 30.34 |
| VIT_09s0002g01400.t01 | Wine grape | nucleus | 27.15 | 30.32 |
| VIT_04s0008g01830.t01 | Wine grape | nucleus | 22.19 | 30.14 |
| VIT_17s0000g08480.t01 | Wine grape | nucleus | 16.97 | 30.09 |
| VIT_04s0008g01820.t01 | Wine grape | nucleus | 22.98 | 29.63 |
| CDX80105 | Canola | nucleus | 25.07 | 29.36 |
| VIT_06s0004g00570.t01 | Wine grape | nucleus, plastid | 22.98 | 28.21 |
| VIT_08s0007g07230.t01 | Wine grape | nucleus | 22.45 | 26.88 |
| VIT_09s0002g01410.t01 | Wine grape | nucleus | 20.63 | 26.69 |
| Bra004456.1-P | Field mustard | nucleus | 25.33 | 26.58 |
Protein Annotations
| Gene3D:1.10.10.60 | EntrezGene:100251652 | wikigene:100251652 | MapMan:15.5.2.1 | ProteinID:CCB47992 | ProteinID:CCB47992.1 |
| UniProt:F6H744 | EMBL:FN595246 | GO:GO:0000981 | GO:GO:0001135 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006357 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0030154 | GO:GO:0043565 | GO:GO:0044212 | GO:GO:0045893 | InterPro:Homeobox-like_sf |
| InterPro:IPR017930 | EntrezGene:LOC100251652 | wikigene:LOC100251652 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF595 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00015CBB58 |
| ArrayExpress:VIT_05s0077g01360 | EnsemblPlantsGene:VIT_05s0077g01360 | EnsemblPlants:VIT_05s0077g01360.t01 | RefSeq:XP_002271862 | RefSeq:XP_002271862.1 | SEG:seg |
Description
No Description!
Coordinates
chr5:+:1104556..1106597
Molecular Weight (calculated)
42522.1 Da
IEP (calculated)
5.272
GRAVY (calculated)
-0.664
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKM GLKKGRWTEQ EDEILRKYIQ ANGEGCWRSL PKNAGLLRCG KSCRLRWVNY LRDDLKRGNI TAEEEDTIVK LHSSWGNRWS LIAGHLPGRT
101: DNEIKNYWNS HLSRRIISFT RPSTESIPSS PPMVKTDGSN KQKGKRKSRS RFSTSKKTAP SIVEMPLRKP GIGAVSEVLA KEKGTILSTI TGKVEETGEK
201: MSLESLDSNE GGDRRSQLGV QGSCMESGVS IMDQFEETQS VALSAGEVTT SNVGLYSNEA RKTGVLGPFE EQGSEIMCLD NFLEGGVMDP NGAMTPKEKR
301: QNVTISKEIE SLEMDPEKVR ASEGSESGNW SSNAEIGEWF TPSSMNSGLN FECVGWEWEN CVESYELWDG GLDMLSWFWG SGI
101: DNEIKNYWNS HLSRRIISFT RPSTESIPSS PPMVKTDGSN KQKGKRKSRS RFSTSKKTAP SIVEMPLRKP GIGAVSEVLA KEKGTILSTI TGKVEETGEK
201: MSLESLDSNE GGDRRSQLGV QGSCMESGVS IMDQFEETQS VALSAGEVTT SNVGLYSNEA RKTGVLGPFE EQGSEIMCLD NFLEGGVMDP NGAMTPKEKR
301: QNVTISKEIE SLEMDPEKVR ASEGSESGNW SSNAEIGEWF TPSSMNSGLN FECVGWEWEN CVESYELWDG GLDMLSWFWG SGI
001: MGRAPCCEKI GLKRGRWTAE EDEILTKYIQ TNGEGSWRSL PKKAGLLRCG KSCRLRWINY LRRDLKRGNI TSDEEEIIVK LHSLLGNRWS LIATHLPGRT
101: DNEIKNYWNS HLSRKIYAFT AVSGDGHNLL VNDVVLKKSC SSSSGAKNNN KTKKKKKGRT SRSSMKKHKQ MVTASQCFSQ PKELESDFSE GGQNGNFEGE
201: SLGPYEWLDG ELERLLSSCV WECTSEEAVI GVNDEKVCES GDNSSCCVNL FEEEQGSETK IGHVGITEVD HDMTVERERE GSFLSSNSNE NNDKDWWVGL
301: CNSSEVGFGV DEELLDWEFQ GNVTCQSDDL WDLSDIGEIT LE
101: DNEIKNYWNS HLSRKIYAFT AVSGDGHNLL VNDVVLKKSC SSSSGAKNNN KTKKKKKGRT SRSSMKKHKQ MVTASQCFSQ PKELESDFSE GGQNGNFEGE
201: SLGPYEWLDG ELERLLSSCV WECTSEEAVI GVNDEKVCES GDNSSCCVNL FEEEQGSETK IGHVGITEVD HDMTVERERE GSFLSSNSNE NNDKDWWVGL
301: CNSSEVGFGV DEELLDWEFQ GNVTCQSDDL WDLSDIGEIT LE
Arabidopsis Description
MYB111Transcription factor MYB111 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ07]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.