Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G023400.1 | Wheat | nucleus | 91.59 | 91.59 |
| TraesCS1B01G049700.1 | Wheat | nucleus | 89.72 | 89.72 |
| KRG94424 | Soybean | nucleus | 20.25 | 70.65 |
| TraesCS1B01G005200.1 | Wheat | nucleus | 67.6 | 65.36 |
| TraesCS4B01G186000.1 | Wheat | nucleus | 66.04 | 61.27 |
| TraesCS1A01G021500.1 | Wheat | nucleus | 63.55 | 60.53 |
| TraesCS1D01G020900.1 | Wheat | nucleus | 61.68 | 58.41 |
| Zm00001d028842_P001 | Maize | nucleus | 48.6 | 46.57 |
| Zm00001d047671_P001 | Maize | nucleus | 49.53 | 46.22 |
| EER92385 | Sorghum | nucleus | 47.98 | 43.26 |
| TraesCS3B01G515900.1 | Wheat | nucleus | 25.23 | 39.71 |
| TraesCS7B01G169900.1 | Wheat | nucleus | 26.17 | 35.74 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.2 | 35.31 |
| KRH31822 | Soybean | nucleus | 37.38 | 35.09 |
| TraesCS5B01G330100.1 | Wheat | nucleus | 28.04 | 34.22 |
| TraesCS1B01G279400.1 | Wheat | nucleus | 26.17 | 34.01 |
| AT3G62610.1 | Thale cress | nucleus | 35.83 | 33.53 |
| GSMUA_Achr5P21250_001 | Banana | nucleus | 33.33 | 33.33 |
| Bra037419.1-P | Field mustard | nucleus | 35.51 | 33.24 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 38.32 | 33.15 |
| TraesCS3B01G416400.1 | Wheat | nucleus | 27.41 | 32.96 |
| AT5G49330.1 | Thale cress | nucleus | 34.89 | 32.75 |
| TraesCS7B01G070400.1 | Wheat | nucleus | 25.86 | 32.68 |
| Solyc06g009710.2.1 | Tomato | nucleus | 30.22 | 32.66 |
| KRH69237 | Soybean | nucleus | 37.69 | 32.61 |
| PGSC0003DMT400011167 | Potato | nucleus | 27.41 | 32.59 |
| Bra036145.1-P | Field mustard | nucleus | 35.2 | 32.56 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 36.76 | 32.15 |
| KRH11988 | Soybean | nucleus | 33.02 | 32.12 |
| KRH37017 | Soybean | nucleus | 33.33 | 32.04 |
| KRH50769 | Soybean | nucleus | 33.33 | 31.75 |
| KRG96503 | Soybean | nucleus | 34.89 | 31.64 |
| TraesCS4B01G323300.1 | Wheat | nucleus | 23.99 | 31.43 |
| PGSC0003DMT400018841 | Potato | nucleus | 29.59 | 31.35 |
| Solyc12g049350.1.1 | Tomato | nucleus | 28.35 | 31.06 |
| KRH68241 | Soybean | nucleus | 34.58 | 30.92 |
| AT2G47460.1 | Thale cress | nucleus | 35.2 | 30.46 |
| KRH02323 | Soybean | nucleus | 32.71 | 30.0 |
| Solyc01g079620.2.1 | Tomato | nucleus | 31.46 | 29.88 |
| Bra000453.1-P | Field mustard | nucleus | 34.89 | 29.79 |
| TraesCS5B01G119300.1 | Wheat | nucleus | 24.92 | 29.41 |
| VIT_05s0077g01360.t01 | Wine grape | nucleus | 34.58 | 28.98 |
| PGSC0003DMT400023322 | Potato | nucleus | 32.71 | 28.93 |
| TraesCS3B01G290600.1 | Wheat | nucleus | 23.05 | 27.21 |
| Bra004456.1-P | Field mustard | nucleus | 29.91 | 26.3 |
| TraesCS4B01G096500.1 | Wheat | nucleus, plastid | 25.86 | 21.78 |
| CDY27486 | Canola | plastid | 8.1 | 11.02 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G023500.1 | EnsemblPlantsGene:TraesCS1B01G023500 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb-rel_proteinP_C | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF203 | PFAM:PF00249 | PFAM:PF06640 | PFscan:PS51294 | SMART:SM00717 |
| SUPFAM:SSF46689 | TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : |
Description
No Description!
Coordinates
chr1B:+:10944607..10948303
Molecular Weight (calculated)
35610.9 Da
IEP (calculated)
4.898
GRAVY (calculated)
-0.493
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKV ALKQGRWTAE EDDILTKYIA QHGEGSWRSL PKNAGLLRCG KSCRLRWLNY LSDGVKRGNF SKEEDNLIVK LHATLGSRWS VIASYLPGRT
101: DNEIKNYWNA HLSRQIYNFR HVYAAFSGIT VTIDVNKFSA TTKRRGGKAL RSSTKMQPMP EPTKSKEGSS PVDTISTTSS QADPDRDQQP INHMTCGVLC
201: SEEAMVMDPV DQNGMVLLMG TNCSDDSVNR VGVFEEESQM EALLSCIGND MAASVLTGIE QGCHSPRVED LLDMDWEGFA SHLWDQPSQS DLLKTAEPQA
301: MTGSESDELE SFISWILSDD A
101: DNEIKNYWNA HLSRQIYNFR HVYAAFSGIT VTIDVNKFSA TTKRRGGKAL RSSTKMQPMP EPTKSKEGSS PVDTISTTSS QADPDRDQQP INHMTCGVLC
201: SEEAMVMDPV DQNGMVLLMG TNCSDDSVNR VGVFEEESQM EALLSCIGND MAASVLTGIE QGCHSPRVED LLDMDWEGFA SHLWDQPSQS DLLKTAEPQA
301: MTGSESDELE SFISWILSDD A
001: MGRAPCCEKI GLKRGRWTAE EDEILTKYIQ TNGEGSWRSL PKKAGLLRCG KSCRLRWINY LRRDLKRGNI TSDEEEIIVK LHSLLGNRWS LIATHLPGRT
101: DNEIKNYWNS HLSRKIYAFT AVSGDGHNLL VNDVVLKKSC SSSSGAKNNN KTKKKKKGRT SRSSMKKHKQ MVTASQCFSQ PKELESDFSE GGQNGNFEGE
201: SLGPYEWLDG ELERLLSSCV WECTSEEAVI GVNDEKVCES GDNSSCCVNL FEEEQGSETK IGHVGITEVD HDMTVERERE GSFLSSNSNE NNDKDWWVGL
301: CNSSEVGFGV DEELLDWEFQ GNVTCQSDDL WDLSDIGEIT LE
101: DNEIKNYWNS HLSRKIYAFT AVSGDGHNLL VNDVVLKKSC SSSSGAKNNN KTKKKKKGRT SRSSMKKHKQ MVTASQCFSQ PKELESDFSE GGQNGNFEGE
201: SLGPYEWLDG ELERLLSSCV WECTSEEAVI GVNDEKVCES GDNSSCCVNL FEEEQGSETK IGHVGITEVD HDMTVERERE GSFLSSNSNE NNDKDWWVGL
301: CNSSEVGFGV DEELLDWEFQ GNVTCQSDDL WDLSDIGEIT LE
Arabidopsis Description
MYB111Transcription factor MYB111 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ07]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.