Factsheet for TraesCS3B01G515900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G100500.1	Barley	nucleus	70.1	56.08
TraesCS3D01G468400.1	Wheat	nucleus	72.55	55.85
VIT_11s0016g01310.t01	Wine grape	nucleus	48.53	45.0
TraesCS7B01G070400.1	Wheat	nucleus	52.45	42.13
GSMUA_Achr10P...	Banana	nucleus	56.37	41.37
EER92144	Sorghum	nucleus	59.31	41.16
TraesCS4B01G323300.1	Wheat	nucleus	48.53	40.41
VIT_11s0016g01320.t01	Wine grape	nucleus	50.49	36.27
TraesCS7B01G169900.1	Wheat	nucleus	41.67	36.17
TraesCS1B01G279400.1	Wheat	nucleus	43.63	36.03
Bra035532.1-P	Field mustard	nucleus	45.59	35.77
CDX84119	Canola	nucleus	45.59	35.63
CDY49363	Canola	nucleus	45.59	35.63
KRH19274	Soybean	nucleus	50.98	34.21
KRH47594	Soybean	nucleus	45.59	33.94
KRH02634	Soybean	nucleus	50.98	33.88
KRH06177	Soybean	nucleus	47.06	33.68
TraesCS3B01G290600.1	Wheat	nucleus	44.61	33.46
TraesCS3B01G416400.1	Wheat	nucleus	43.63	33.33
TraesCS5B01G330100.1	Wheat	nucleus	41.67	32.32
TraesCS5B01G119300.1	Wheat	nucleus	41.18	30.88
Solyc12g049300.1.1	Tomato	nucleus	50.98	29.55
AT5G35550.2	Thale cress	nucleus	37.25	29.12
TraesCS1B01G023400.1	Wheat	nucleus	40.69	25.86
TraesCS4B01G186000.1	Wheat	nucleus	43.14	25.43
TraesCS1B01G023500.1	Wheat	nucleus	39.71	25.23
TraesCS1B01G005200.1	Wheat	nucleus	40.69	25.0
TraesCS1B01G049700.1	Wheat	nucleus	39.22	24.92
TraesCS4B01G096500.1	Wheat	nucleus, plastid	42.16	22.57
PGSC0003DMT400030322	Potato	nucleus	1.96	2.44

Protein Annotations

EnsemblPlants:TraesCS3B01G515900.1	EnsemblPlantsGene:TraesCS3B01G515900	Gene3D:1.10.10.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0005488	InterPro:Homeobox-like_sf	InterPro:IPR017930	InterPro:Myb_dom	InterPro:SANT/Myb	PANTHER:PTHR10641
PANTHER:PTHR10641:SF459	PFAM:PF00249	PFscan:PS51294	SEG:seg	SMART:SM00717	SUPFAM:SSF46689
TIGR:cd00167	MapMan:15.5.2.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:757918298..757920082

Molecular Weight (calculated)

23147.7 Da

IEP (calculated)

11.908

GRAVY (calculated)

-0.876

Length

204 amino acids

Sequence
(BLAST)

001: MGRKPCCAKE GLNRGAWTAM EDEILVSYIN DHGEGKWGSL PKRAGLNRCG KSCRLRWLNY LRPGIKRGNI SDDEEELIVR LHRLLGNRWS LIAGRLPGRT
101: DNEIKNYWNT TLSKRNLQSH GAGCSNHPQA KPPAARRTPC PRARAAARYG PRRCGAPPRC WRQQRGFTSR AVRRRSTSRR RISWVTACPS ARSTSIWRAS
201: SWAS

Best Arabidopsis Sequence Match ( AT1G22640.1 )
(BLAST)

001: MGRSPCCEKA HMNKGAWTKE EDQLLVDYIR KHGEGCWRSL PRAAGLQRCG KSCRLRWMNY LRPDLKRGNF TEEEDELIIK LHSLLGNKWS LIAGRLPGRT
101: DNEIKNYWNT HIKRKLLSRG IDPNSHRLIN ESVVSPSSLQ NDVVETIHLD FSGPVKPEPV REEIGMVNNC ESSGTTSEKD YGNEEDWVLN LELSVGPSYR
201: YESTRKVSVV DSAESTRRWG SELFGAHESD AVCLCCRIGL FRNESCRNCR VSDVRTH

Arabidopsis Description

MYB3MYB3 [Source:UniProtKB/TrEMBL;Acc:A0A178WFN1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.