Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G384400.1 | Wheat | nucleus | 98.13 | 98.13 |
| TraesCS3D01G377300.1 | Wheat | nucleus | 98.88 | 97.42 |
| HORVU3Hr1G082210.1 | Barley | nucleus | 96.63 | 95.56 |
| Zm00001d012255_P001 | Maize | nucleus | 75.66 | 80.48 |
| EES01839 | Sorghum | nucleus | 78.65 | 78.07 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.45 | 77.85 |
| Os01t0874300-01 | Rice | extracellular, nucleus | 82.77 | 77.0 |
| Zm00001d042665_P001 | Maize | nucleus | 74.91 | 76.34 |
| GSMUA_Achr3P22200_001 | Banana | nucleus | 61.05 | 75.12 |
| GSMUA_Achr2P20600_001 | Banana | nucleus | 47.19 | 72.0 |
| TraesCS1B01G279400.1 | Wheat | nucleus | 63.67 | 68.83 |
| GSMUA_Achr5P26000_001 | Banana | nucleus | 50.19 | 63.81 |
| GSMUA_Achr6P25420_001 | Banana | nucleus | 56.18 | 63.29 |
| GSMUA_Achr6P07260_001 | Banana | mitochondrion | 46.82 | 62.81 |
| GSMUA_Achr10P... | Banana | nucleus | 50.56 | 62.21 |
| GSMUA_Achr8P32480_001 | Banana | nucleus | 44.19 | 59.0 |
| GSMUA_Achr5P17010_001 | Banana | nucleus | 53.18 | 58.92 |
| TraesCS7B01G169900.1 | Wheat | nucleus | 50.94 | 57.87 |
| AT1G35515.1 | Thale cress | nucleus | 44.94 | 56.6 |
| GSMUA_Achr9P08600_001 | Banana | nucleus | 55.06 | 54.04 |
| CDX90721 | Canola | nucleus | 44.19 | 52.68 |
| Bra000680.1-P | Field mustard | nucleus | 44.19 | 52.68 |
| TraesCS5B01G330100.1 | Wheat | nucleus | 51.31 | 52.09 |
| CDY05057 | Canola | nucleus | 43.82 | 51.54 |
| AT4G09460.1 | Thale cress | nucleus | 45.32 | 51.27 |
| TraesCS5B01G119300.1 | Wheat | nucleus | 51.31 | 50.37 |
| Solyc06g065100.2.1 | Tomato | nucleus | 50.56 | 48.39 |
| GSMUA_Achr6P12930_001 | Banana | nucleus | 51.69 | 48.25 |
| KRH54016 | Soybean | nucleus | 53.56 | 47.51 |
| PGSC0003DMT400080427 | Potato | nucleus | 50.56 | 47.37 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 50.56 | 46.55 |
| KRH63931 | Soybean | nucleus | 52.43 | 46.36 |
| TraesCS3B01G515900.1 | Wheat | nucleus | 33.33 | 43.63 |
| TraesCS4B01G096500.1 | Wheat | nucleus, plastid | 53.93 | 37.8 |
| TraesCS4B01G323300.1 | Wheat | nucleus | 32.21 | 35.1 |
| TraesCS7B01G070400.1 | Wheat | nucleus | 32.96 | 34.65 |
| TraesCS3B01G290600.1 | Wheat | nucleus | 33.71 | 33.09 |
| TraesCS1B01G023500.1 | Wheat | nucleus | 32.96 | 27.41 |
| TraesCS1B01G049700.1 | Wheat | nucleus | 32.21 | 26.79 |
| TraesCS1B01G023400.1 | Wheat | nucleus | 32.21 | 26.79 |
| TraesCS4B01G186000.1 | Wheat | nucleus | 34.46 | 26.59 |
| TraesCS1B01G005200.1 | Wheat | nucleus | 32.21 | 25.9 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G416400.1 | EnsemblPlantsGene:TraesCS3B01G416400 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF617 | PFAM:PF00249 | PFscan:PS51294 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 |
| TIGR:cd00167 | MapMan:15.5.2.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:653152051..653152976
Molecular Weight (calculated)
29125.6 Da
IEP (calculated)
8.806
GRAVY (calculated)
-0.539
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKA HTNKGAWTKE EDQRLIGYIK AHGEGCWRSL PKAAGLLRCG KSCRLRWMNY LRPDLKRGNF TDDDDELIIK LHALLGNKWS LIAGQLPGRT
101: DNEIKNYWNT HIKRKLLNRG MDPHTHCPIS AASGLTTSTT APVFPSSPAP ASRLANAPFA FQSSTVSFAR PSPSDDGHSS SGGSSDAPRC PDLNLDLDLD
201: LSMSLPCSPP KTAPPAKSTP TSHQQQGICL CYHLGVRNGE ACTCKTASPA GPRVFRFLRP LEEGQYI
101: DNEIKNYWNT HIKRKLLNRG MDPHTHCPIS AASGLTTSTT APVFPSSPAP ASRLANAPFA FQSSTVSFAR PSPSDDGHSS SGGSSDAPRC PDLNLDLDLD
201: LSMSLPCSPP KTAPPAKSTP TSHQQQGICL CYHLGVRNGE ACTCKTASPA GPRVFRFLRP LEEGQYI
001: MGRSPCCEKA HMNKGAWTKE EDQRLIDYIR NHGEGSWRSL PKSVGLLRCG KSCRLRWINY LRPDLKRGNF TDGEEQIIVK LHSLFGNKWS LIAGKLPGRT
101: DNEIKNYWNT HIKRKLLNRG IDPKTHGSII EPKTTSFHPR NEDLKSTFPG SVKLKMETSC ENCASTSGTT TDEDLRLSVD CDYRYDHLDK ELNLDLTLGY
201: SPTRFVGVGS CY
101: DNEIKNYWNT HIKRKLLNRG IDPKTHGSII EPKTTSFHPR NEDLKSTFPG SVKLKMETSC ENCASTSGTT TDEDLRLSVD CDYRYDHLDK ELNLDLTLGY
201: SPTRFVGVGS CY
Arabidopsis Description
MYB8Transcription factor MYB8 [Source:UniProtKB/Swiss-Prot;Acc:Q9SDS8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.