Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG94424 | Soybean | nucleus | 20.87 | 72.83 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.73 | 59.73 |
| GSMUA_Achr11P... | Banana | nucleus | 26.79 | 51.5 |
| GSMUA_Achr2P20600_001 | Banana | nucleus | 28.04 | 51.43 |
| GSMUA_Achr9P24180_001 | Banana | nucleus | 27.41 | 50.87 |
| GSMUA_Achr1P02420_001 | Banana | nucleus | 29.28 | 48.21 |
| GSMUA_Achr8P32480_001 | Banana | nucleus | 27.73 | 44.5 |
| GSMUA_Achr6P07260_001 | Banana | mitochondrion | 27.41 | 44.22 |
| GSMUA_Achr8P33900_001 | Banana | nucleus | 27.73 | 43.84 |
| GSMUA_AchrUn_... | Banana | nucleus | 26.48 | 43.81 |
| GSMUA_Achr10P... | Banana | nucleus | 27.1 | 42.23 |
| GSMUA_Achr3P22200_001 | Banana | nucleus | 28.35 | 41.94 |
| GSMUA_Achr4P25710_001 | Banana | nucleus | 24.92 | 41.67 |
| GSMUA_Achr10P... | Banana | nucleus | 28.04 | 41.47 |
| GSMUA_Achr5P26000_001 | Banana | nucleus | 27.1 | 41.43 |
| GSMUA_Achr1P26520_001 | Banana | nucleus | 28.97 | 38.59 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.32 | 38.44 |
| GSMUA_Achr3P07950_001 | Banana | nucleus | 28.04 | 37.82 |
| GSMUA_Achr1P07550_001 | Banana | nucleus | 27.73 | 37.55 |
| GSMUA_Achr6P25420_001 | Banana | nucleus | 27.41 | 37.13 |
| GSMUA_Achr6P09620_001 | Banana | nucleus | 23.05 | 37.0 |
| PGSC0003DMT400011167 | Potato | nucleus | 29.91 | 35.56 |
| GSMUA_Achr9P16040_001 | Banana | nucleus | 28.35 | 35.41 |
| GSMUA_Achr5P17010_001 | Banana | nucleus | 26.48 | 35.27 |
| Solyc06g009710.2.1 | Tomato | nucleus | 32.4 | 35.02 |
| GSMUA_Achr8P10470_001 | Banana | nucleus | 39.88 | 34.5 |
| PGSC0003DMT400018841 | Potato | nucleus | 32.4 | 34.32 |
| GSMUA_Achr9P27380_001 | Banana | nucleus | 27.73 | 34.23 |
| GSMUA_Achr3P07940_001 | Banana | nucleus | 29.91 | 34.04 |
| CDY05636 | Canola | nucleus | 30.53 | 33.79 |
| TraesCS1D01G021700.1 | Wheat | nucleus | 33.02 | 33.76 |
| TraesCS1B01G023400.1 | Wheat | nucleus | 33.64 | 33.64 |
| GSMUA_Achr6P12930_001 | Banana | nucleus | 29.91 | 33.57 |
| Solyc12g049350.1.1 | Tomato | nucleus | 30.53 | 33.45 |
| Os01t0305900-01 | Rice | nucleus | 33.02 | 33.44 |
| TraesCS1B01G023500.1 | Wheat | nucleus | 33.33 | 33.33 |
| HORVU4Hr1G054420.3 | Barley | nucleus | 35.2 | 33.24 |
| GSMUA_Achr11P... | Banana | nucleus | 24.3 | 33.19 |
| GSMUA_Achr9P08600_001 | Banana | nucleus | 28.04 | 33.09 |
| TraesCS1B01G049700.1 | Wheat | nucleus | 33.02 | 33.02 |
| Zm00001d028842_P001 | Maize | nucleus | 34.27 | 32.84 |
| GSMUA_Achr2P19380_001 | Banana | nucleus | 24.92 | 32.79 |
| GSMUA_Achr10P... | Banana | nucleus | 28.35 | 32.73 |
| GSMUA_Achr6P04400_001 | Banana | nucleus | 28.04 | 32.73 |
| GSMUA_Achr3P21000_001 | Banana | nucleus | 25.86 | 32.68 |
| VIT_07s0005g01210.t01 | Wine grape | nucleus | 37.07 | 32.43 |
| TraesCS4D01G187100.1 | Wheat | nucleus | 34.89 | 32.37 |
| TraesCS4B01G186000.1 | Wheat | nucleus | 34.89 | 32.37 |
| TraesCS4A01G118400.1 | Wheat | nucleus | 34.89 | 32.37 |
| GSMUA_Achr3P27700_001 | Banana | nucleus | 27.41 | 32.12 |
| TraesCS1A01G021500.1 | Wheat | nucleus | 33.64 | 32.05 |
| Zm00001d047671_P001 | Maize | nucleus | 34.27 | 31.98 |
| KRH31822 | Soybean | nucleus | 33.96 | 31.87 |
| CDX83327 | Canola | nucleus | 34.89 | 31.82 |
| TraesCS1B01G005200.1 | Wheat | nucleus | 32.71 | 31.63 |
| GSMUA_Achr7P18560_001 | Banana | nucleus | 26.48 | 31.6 |
| GSMUA_Achr5P01180_001 | Banana | nucleus | 25.55 | 31.54 |
| EER92385 | Sorghum | nucleus | 34.89 | 31.46 |
| CDX95725 | Canola | nucleus | 34.58 | 31.44 |
| GSMUA_Achr2P17960_001 | Banana | nucleus | 25.23 | 31.4 |
| KRH69237 | Soybean | nucleus | 36.14 | 31.27 |
| KRH11988 | Soybean | nucleus | 32.09 | 31.21 |
| AT3G62610.1 | Thale cress | nucleus | 33.33 | 31.2 |
| KRH37017 | Soybean | nucleus | 32.4 | 31.14 |
| AT5G49330.1 | Thale cress | nucleus | 33.02 | 30.99 |
| GSMUA_Achr10P... | Banana | nucleus | 27.41 | 30.99 |
| TraesCS1D01G020900.1 | Wheat | nucleus | 32.71 | 30.97 |
| CDY00035 | Canola | nucleus | 31.78 | 30.91 |
| KRH50769 | Soybean | nucleus | 32.4 | 30.86 |
| Zm00001d040621_P002 | Maize | nucleus | 33.96 | 30.79 |
| Solyc01g079620.2.1 | Tomato | nucleus | 32.4 | 30.77 |
| OQU86782 | Sorghum | nucleus | 34.58 | 30.75 |
| CDX85403 | Canola | nucleus | 32.4 | 30.41 |
| GSMUA_Achr8P22690_001 | Banana | nucleus | 27.41 | 30.34 |
| Bra037419.1-P | Field mustard | nucleus | 32.4 | 30.32 |
| CDX86237 | Canola | nucleus | 32.4 | 30.32 |
| AT2G47460.1 | Thale cress | nucleus | 34.89 | 30.19 |
| GSMUA_Achr4P21700_001 | Banana | nucleus | 21.81 | 30.17 |
| PGSC0003DMT400023322 | Potato | nucleus | 33.96 | 30.03 |
| CDY55384 | Canola | nucleus | 27.41 | 29.83 |
| Bra000453.1-P | Field mustard | nucleus | 34.89 | 29.79 |
| KRH02323 | Soybean | nucleus | 32.4 | 29.71 |
| Bra036145.1-P | Field mustard | nucleus | 32.09 | 29.68 |
| GSMUA_Achr7P18550_001 | Banana | nucleus | 24.3 | 29.55 |
| VIT_05s0077g01360.t01 | Wine grape | nucleus | 34.89 | 29.24 |
| KRG96503 | Soybean | nucleus | 32.09 | 29.1 |
| GSMUA_Achr6P14840_001 | Banana | nucleus | 26.17 | 28.97 |
| CDY49609 | Canola | nucleus | 31.46 | 28.94 |
| KRH68241 | Soybean | nucleus | 32.09 | 28.69 |
| GSMUA_Achr8P14540_001 | Banana | nucleus | 23.05 | 28.46 |
| GSMUA_Achr10P... | Banana | nucleus | 26.17 | 28.19 |
| CDX80105 | Canola | nucleus | 27.41 | 26.91 |
| GSMUA_Achr7P13700_001 | Banana | nucleus | 25.23 | 26.38 |
| Bra004456.1-P | Field mustard | nucleus | 27.41 | 24.11 |
| GSMUA_Achr5P06530_001 | Banana | nucleus | 27.1 | 23.2 |
| GSMUA_Achr6P02530_001 | Banana | nucleus | 24.92 | 22.16 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| EnsemblPlantsGene:GSMUA_Achr5G21250_001 | EnsemblPlants:GSMUA_Achr5P21250_001 | EnsemblPlants:GSMUA_Achr5T21250_001 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | UniProt:M0T0F4 |
| InterPro:Myb-rel_proteinP_C | InterPro:Myb_dom | PFAM:PF00249 | PFAM:PF06640 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF595 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000295A9BB | SEG:seg |
Description
MYB family transcription factor, putative [Source:GMGC_GENE;Acc:GSMUA_Achr5G21250_001]
Coordinates
chr5:-:23271254..23273494
Molecular Weight (calculated)
35504.6 Da
IEP (calculated)
5.298
GRAVY (calculated)
-0.589
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCAKV GLKKGRWSAE EDEILVKYIA ANGEGSWRSL PKNAGLLRCG KSCRLRWINY LRSGLKRGNF TKEEEEIIVK LHATLGNRWS LIAGHLPART
101: DNEIKNYWNS HLSKKLQSFQ QNGLDVGGTA VVDLSKLPGG VRRRGGRTSR LRTTTERNTK NGTTRREKQG MVVVSPPASL AQSEEGHSVV LHADQSQASS
201: ACTFDGNTNE GVMDRNEEMV SELLCASAMD SVLVGPSEET MAGWGSHDGD SGVIGGTTVE ELVPSQMDKF LDWDMEIMEA KLWDEAGDIW PWMWDSESRE
301: WGFHGVDDSG SQEESLDSWL T
101: DNEIKNYWNS HLSKKLQSFQ QNGLDVGGTA VVDLSKLPGG VRRRGGRTSR LRTTTERNTK NGTTRREKQG MVVVSPPASL AQSEEGHSVV LHADQSQASS
201: ACTFDGNTNE GVMDRNEEMV SELLCASAMD SVLVGPSEET MAGWGSHDGD SGVIGGTTVE ELVPSQMDKF LDWDMEIMEA KLWDEAGDIW PWMWDSESRE
301: WGFHGVDDSG SQEESLDSWL T
001: MGRAPCCEKV GIKRGRWTAE EDQILSNYIQ SNGEGSWRSL PKNAGLKRCG KSCRLRWINY LRSDLKRGNI TPEEEELVVK LHSTLGNRWS LIAGHLPGRT
101: DNEIKNYWNS HLSRKLHNFI RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN ADVAGADKEA LMVESSGAEA
201: ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN
301: DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD DESALVAWLL S
101: DNEIKNYWNS HLSRKLHNFI RKPSISQDVS AVIMTNASSA PPPPQAKRRL GRTSRSAMKP KIHRTKTRKT KKTSAPPEPN ADVAGADKEA LMVESSGAEA
201: ELGRPCDYYG DDCNKNLMSI NGDNGVLTFD DDIIDLLLDE SDPGHLYTNT TCGGDGELHN IRDSEGARGF SDTWNQGNLD CLLQSCPSVE SFLNYDHQVN
301: DASTDEFIDW DCVWQEGSDN NLWHEKENPD SMVSWLLDGD DEATIGNSNC ENFGEPLDHD DESALVAWLL S
Arabidopsis Description
MYB12Transcription factor MYB12 [Source:UniProtKB/Swiss-Prot;Acc:O22264]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.