Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra036145.1-P | Field mustard | nucleus | 96.36 | 91.64 |
CDY49609 | Canola | nucleus | 96.06 | 90.83 |
CDX86237 | Canola | nucleus | 80.91 | 77.84 |
CDX85403 | Canola | nucleus | 80.3 | 77.49 |
CDY05636 | Canola | nucleus | 66.06 | 75.17 |
AT5G49330.1 | Thale cress | nucleus | 77.58 | 74.85 |
CDX90721 | Canola | nucleus | 27.88 | 41.07 |
CDX91687 | Canola | nucleus | 27.58 | 40.44 |
CDY05057 | Canola | nucleus | 27.58 | 40.09 |
PGSC0003DMT400011167 | Potato | nucleus | 32.42 | 39.63 |
Solyc06g009710.2.1 | Tomato | nucleus | 33.64 | 37.37 |
CDX91023 | Canola | nucleus | 22.42 | 37.37 |
CDX85583 | Canola | nucleus | 22.42 | 37.37 |
CDX69561 | Canola | nucleus | 22.12 | 37.06 |
GSMUA_AchrUn_... | Banana | nucleus | 35.45 | 36.56 |
CDY09882 | Canola | nucleus | 21.82 | 36.36 |
PGSC0003DMT400018841 | Potato | nucleus | 33.33 | 36.3 |
Solyc12g049350.1.1 | Tomato | nucleus | 32.12 | 36.18 |
CDY55384 | Canola | nucleus | 31.52 | 35.25 |
Solyc01g079620.2.1 | Tomato | nucleus | 36.06 | 35.21 |
VIT_07s0005g01210.t01 | Wine grape | nucleus | 38.79 | 34.88 |
CDY27055 | Canola | nucleus | 20.61 | 34.34 |
CDY40652 | Canola | nucleus | 28.18 | 34.32 |
CDX72510 | Canola | nucleus | 28.18 | 34.32 |
CDY04798 | Canola | nucleus | 27.88 | 34.2 |
CDY21378 | Canola | nucleus | 27.88 | 34.2 |
CDY07085 | Canola | nucleus | 25.76 | 33.86 |
CDY24177 | Canola | nucleus | 25.76 | 33.86 |
CDY23616 | Canola | nucleus | 23.33 | 33.77 |
CDY25747 | Canola | nucleus | 26.97 | 33.71 |
CDY65324 | Canola | nucleus | 20.61 | 33.5 |
GSMUA_Achr8P10470_001 | Banana | nucleus | 37.58 | 33.42 |
PGSC0003DMT400023322 | Potato | nucleus | 36.67 | 33.33 |
CDX80105 | Canola | nucleus | 32.73 | 33.03 |
CDY12520 | Canola | nucleus | 26.97 | 32.72 |
CDX90285 | Canola | nucleus | 27.88 | 32.51 |
CDX69102 | Canola | nucleus | 27.88 | 32.17 |
CDY56151 | Canola | nucleus | 19.39 | 32.16 |
CDX83327 | Canola | nucleus | 34.24 | 32.1 |
CDX75478 | Canola | nucleus | 27.88 | 32.06 |
GSMUA_Achr5P21250_001 | Banana | nucleus | 30.91 | 31.78 |
CDX95725 | Canola | nucleus | 33.94 | 31.73 |
CDY51833 | Canola | nucleus | 19.09 | 31.66 |
CDY66972 | Canola | nucleus | 18.79 | 31.0 |
CDY59254 | Canola | nucleus | 23.94 | 30.98 |
CDY22416 | Canola | nucleus | 27.58 | 30.95 |
CDX72743 | Canola | nucleus | 27.58 | 30.95 |
CDY72116 | Canola | nucleus | 26.36 | 30.31 |
CDY02243 | Canola | nucleus | 26.36 | 30.31 |
CDY12092 | Canola | nucleus | 27.58 | 29.93 |
CDX84119 | Canola | nucleus | 23.64 | 29.89 |
CDX86461 | Canola | nucleus | 20.3 | 29.78 |
CDY49363 | Canola | nucleus | 23.03 | 29.12 |
CDY52797 | Canola | nucleus | 22.42 | 28.68 |
CDY44571 | Canola | nucleus | 20.61 | 26.67 |
CDY27486 | Canola | plastid | 6.67 | 9.32 |
Protein Annotations
EnsemblPlants:CDY00035 | EnsemblPlantsGene:GSBRNA2T00109519001 | Gene3D:1.10.10.60 | GO:A0A078ED87 | GO:GO:0003674 | GO:GO:0003676 |
GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
PANTHER:PTHR10641 | PANTHER:PTHR10641:SF203 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDY00035 | ProteinID:CDY00035.1 |
SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EF1165 | MapMan:15.5.2.1 | : |
Description
BnaC09g02660D
Coordinates
chrLK031916:+:370331..373373
Molecular Weight (calculated)
37414.6 Da
IEP (calculated)
5.966
GRAVY (calculated)
-0.860
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRAPCCEKI GLKRGRWTAE EDETLTNYIQ INGEGSWRSL PKKAGLLRCG KSCRLRWINY LRMDLKRGNI TAEEDDTIVK LHSLLGNRWS LIATHLPGRT
101: DNEIKNYWNS HLSRKIYAFT SVRRDEHGPN INDFVLNKSS SSSSCSSSDA KNTNKTKKKK GRTSRSCMKK HKQMVTASQC FPQPKELESE VSEEGKNGNF
201: EGKALEPYEW LDGEIGRLMS SFVWECTSEE VVNEVNDNDS GQNKVCESGD NSSCYVRLFE EEHGKLGNLE VDHDMNVKKE REGSGLSSNS YENGDKDWWV
301: GLCDSLEVGF GIDDELLGWE FQSSVPLDRT
101: DNEIKNYWNS HLSRKIYAFT SVRRDEHGPN INDFVLNKSS SSSSCSSSDA KNTNKTKKKK GRTSRSCMKK HKQMVTASQC FPQPKELESE VSEEGKNGNF
201: EGKALEPYEW LDGEIGRLMS SFVWECTSEE VVNEVNDNDS GQNKVCESGD NSSCYVRLFE EEHGKLGNLE VDHDMNVKKE REGSGLSSNS YENGDKDWWV
301: GLCDSLEVGF GIDDELLGWE FQSSVPLDRT
001: MGRAPCCEKI GLKRGRWTAE EDEILTKYIQ TNGEGSWRSL PKKAGLLRCG KSCRLRWINY LRRDLKRGNI TSDEEEIIVK LHSLLGNRWS LIATHLPGRT
101: DNEIKNYWNS HLSRKIYAFT AVSGDGHNLL VNDVVLKKSC SSSSGAKNNN KTKKKKKGRT SRSSMKKHKQ MVTASQCFSQ PKELESDFSE GGQNGNFEGE
201: SLGPYEWLDG ELERLLSSCV WECTSEEAVI GVNDEKVCES GDNSSCCVNL FEEEQGSETK IGHVGITEVD HDMTVERERE GSFLSSNSNE NNDKDWWVGL
301: CNSSEVGFGV DEELLDWEFQ GNVTCQSDDL WDLSDIGEIT LE
101: DNEIKNYWNS HLSRKIYAFT AVSGDGHNLL VNDVVLKKSC SSSSGAKNNN KTKKKKKGRT SRSSMKKHKQ MVTASQCFSQ PKELESDFSE GGQNGNFEGE
201: SLGPYEWLDG ELERLLSSCV WECTSEEAVI GVNDEKVCES GDNSSCCVNL FEEEQGSETK IGHVGITEVD HDMTVERERE GSFLSSNSNE NNDKDWWVGL
301: CNSSEVGFGV DEELLDWEFQ GNVTCQSDDL WDLSDIGEIT LE
Arabidopsis Description
MYB111Transcription factor MYB111 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJ07]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.