Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017685.1-P | Field mustard | nucleus | 97.79 | 97.79 |
| CDY40652 | Canola | nucleus | 97.79 | 97.79 |
| CDX75478 | Canola | nucleus | 82.29 | 77.7 |
| CDX69102 | Canola | nucleus | 81.18 | 76.92 |
| AT4G34990.1 | Thale cress | nucleus | 77.12 | 76.28 |
| CDY02243 | Canola | nucleus | 64.94 | 61.32 |
| CDY72116 | Canola | nucleus | 64.58 | 60.98 |
| CDX90285 | Canola | nucleus | 57.93 | 55.48 |
| CDX90721 | Canola | nucleus | 43.91 | 53.12 |
| CDX91687 | Canola | nucleus | 43.91 | 52.89 |
| CDX72743 | Canola | nucleus | 57.2 | 52.72 |
| CDY22416 | Canola | nucleus | 57.2 | 52.72 |
| CDY05057 | Canola | nucleus | 43.54 | 51.98 |
| CDY12092 | Canola | nucleus | 57.56 | 51.32 |
| CDY52797 | Canola | nucleus | 48.71 | 51.16 |
| CDY25747 | Canola | nucleus | 47.23 | 48.48 |
| CDY21378 | Canola | nucleus | 47.23 | 47.58 |
| CDY04798 | Canola | nucleus | 47.23 | 47.58 |
| CDY12520 | Canola | nucleus | 46.86 | 46.69 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 49.08 | 45.86 |
| KRH54016 | Soybean | nucleus | 48.34 | 43.52 |
| KRH63931 | Soybean | nucleus | 47.97 | 43.05 |
| CDY27055 | Canola | nucleus | 28.78 | 39.39 |
| CDY65324 | Canola | nucleus | 29.15 | 38.92 |
| CDX69561 | Canola | nucleus | 27.68 | 38.07 |
| CDY09882 | Canola | nucleus | 27.31 | 37.37 |
| CDY56151 | Canola | nucleus | 27.31 | 37.19 |
| CDY51833 | Canola | nucleus | 27.31 | 37.19 |
| CDX91023 | Canola | nucleus | 26.94 | 36.87 |
| CDX85583 | Canola | nucleus | 26.94 | 36.87 |
| CDY23616 | Canola | nucleus | 31.0 | 36.84 |
| CDY07085 | Canola | nucleus | 33.58 | 36.26 |
| CDY24177 | Canola | nucleus | 33.21 | 35.86 |
| CDY59254 | Canola | nucleus | 32.47 | 34.51 |
| CDY66972 | Canola | nucleus | 24.35 | 33.0 |
| CDX84119 | Canola | nucleus | 31.73 | 32.95 |
| CDY49363 | Canola | nucleus | 31.73 | 32.95 |
| CDX86461 | Canola | nucleus | 25.46 | 30.67 |
| CDY05636 | Canola | nucleus | 32.1 | 30.0 |
| CDX83327 | Canola | nucleus | 37.27 | 28.69 |
| CDX95725 | Canola | nucleus | 36.9 | 28.33 |
| CDY00035 | Canola | nucleus | 34.32 | 28.18 |
| CDY44571 | Canola | nucleus | 25.46 | 27.06 |
| CDY49609 | Canola | nucleus | 34.69 | 26.93 |
| CDX86237 | Canola | nucleus | 33.21 | 26.24 |
| CDX85403 | Canola | nucleus | 32.84 | 26.02 |
| CDY55384 | Canola | nucleus | 28.04 | 25.76 |
| CDX80105 | Canola | nucleus | 28.41 | 23.55 |
| CDY27486 | Canola | plastid | 6.64 | 7.63 |
Protein Annotations
| Gene3D:1.10.10.60 | MapMan:15.5.2.1 | GO:A0A078C6Q4 | UniProt:A0A078C6Q4 | EnsemblPlants:CDX72510 | ProteinID:CDX72510 |
| ProteinID:CDX72510.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | EnsemblPlantsGene:GSBRNA2T00100042001 |
| InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | PFAM:PF00249 | PFscan:PS51294 | PANTHER:PTHR10641 |
| PANTHER:PTHR10641:SF741 | InterPro:SANT/Myb | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000189D942 | SEG:seg |
Description
BnaC07g45320DBnaC07g45320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078C6Q4]
Coordinates
chrLK031796:-:1633697..1634594
Molecular Weight (calculated)
30994.8 Da
IEP (calculated)
8.879
GRAVY (calculated)
-0.765
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKD HTNKGAWTKE EDQKLISYIK SHGEGCWRSL PASAGLLRCG KSCRLRWINY LRPDLKRGNF TLEEDDLIIK LHSLLGNKWS LIATRLPGRT
101: DNEIKNYWNT HMKRKLLRGG IDPATHRPIK ARRDASEARE TEDSLVKVIS FGPQLEKEES SREEGRFKKS LTCKTKSLDL NLELRISPPW QDQHRRDERK
201: LLFRKEKYLC SACRFGLGNG KECSCENVRC HIDDSSSSSY SSSDISSSVV GFDFLGLNTS SVLDYTSLEM N
101: DNEIKNYWNT HMKRKLLRGG IDPATHRPIK ARRDASEARE TEDSLVKVIS FGPQLEKEES SREEGRFKKS LTCKTKSLDL NLELRISPPW QDQHRRDERK
201: LLFRKEKYLC SACRFGLGNG KECSCENVRC HIDDSSSSSY SSSDISSSVV GFDFLGLNTS SVLDYTSLEM N
001: MGRSPCCEKD HTNKGAWTKE EDDKLISYIK AHGEGCWRSL PRSAGLQRCG KSCRLRWINY LRPDLKRGNF TLEEDDLIIK LHSLLGNKWS LIATRLPGRT
101: DNEIKNYWNT HVKRKLLRKG IDPATHRPIN ETKTSQDSSD SSKTEDPLVK ILSFGPQLEK IANFGDERIQ KRVEYSVVEE RCLDLNLELR ISPPWQDKLH
201: DERNLRFGRV KYRCSACRFG FGNGKECSCN NVKCQTEDSS SSSYSSTDIS SSIGYDFLGL NNTRVLDFST LEMK
101: DNEIKNYWNT HVKRKLLRKG IDPATHRPIN ETKTSQDSSD SSKTEDPLVK ILSFGPQLEK IANFGDERIQ KRVEYSVVEE RCLDLNLELR ISPPWQDKLH
201: DERNLRFGRV KYRCSACRFG FGNGKECSCN NVKCQTEDSS SSSYSSTDIS SSIGYDFLGL NNTRVLDFST LEMK
Arabidopsis Description
MYB32Transcription factor MYB32 [Source:UniProtKB/Swiss-Prot;Acc:O49608]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.