Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011576.1-P | Field mustard | nucleus | 99.65 | 99.65 |
| CDX69102 | Canola | nucleus | 95.82 | 96.15 |
| AT4G34990.1 | Thale cress | nucleus | 81.18 | 85.04 |
| CDY40652 | Canola | nucleus | 79.44 | 84.13 |
| CDX72510 | Canola | nucleus | 77.7 | 82.29 |
| CDY02243 | Canola | nucleus | 66.2 | 66.2 |
| CDY72116 | Canola | nucleus | 65.85 | 65.85 |
| CDX90285 | Canola | nucleus | 56.1 | 56.89 |
| CDX91687 | Canola | nucleus | 42.51 | 54.22 |
| CDX72743 | Canola | nucleus | 55.4 | 54.08 |
| CDY22416 | Canola | nucleus | 55.4 | 54.08 |
| CDY52797 | Canola | nucleus | 48.43 | 53.88 |
| CDX90721 | Canola | nucleus | 41.46 | 53.12 |
| CDY12092 | Canola | nucleus | 55.75 | 52.63 |
| CDY05057 | Canola | nucleus | 40.77 | 51.54 |
| CDY04798 | Canola | nucleus | 46.34 | 49.44 |
| CDY25747 | Canola | nucleus | 45.3 | 49.24 |
| CDY21378 | Canola | nucleus | 45.99 | 49.07 |
| CDY12520 | Canola | nucleus | 44.95 | 47.43 |
| VIT_07s0130g00040.t01 | Wine grape | nucleus | 45.64 | 45.17 |
| KRH54016 | Soybean | nucleus | 47.04 | 44.85 |
| KRH63931 | Soybean | nucleus | 47.04 | 44.7 |
| CDY27055 | Canola | nucleus | 27.53 | 39.9 |
| CDY65324 | Canola | nucleus | 27.53 | 38.92 |
| CDX69561 | Canola | nucleus | 26.48 | 38.58 |
| CDY09882 | Canola | nucleus | 26.13 | 37.88 |
| CDY23616 | Canola | nucleus | 29.97 | 37.72 |
| CDY56151 | Canola | nucleus | 25.78 | 37.19 |
| CDY51833 | Canola | nucleus | 25.78 | 37.19 |
| CDX91023 | Canola | nucleus | 25.44 | 36.87 |
| CDX85583 | Canola | nucleus | 25.44 | 36.87 |
| CDY07085 | Canola | nucleus | 32.06 | 36.65 |
| CDY24177 | Canola | nucleus | 31.71 | 36.26 |
| CDY59254 | Canola | nucleus | 31.36 | 35.29 |
| CDY49363 | Canola | nucleus | 30.66 | 33.72 |
| CDX84119 | Canola | nucleus | 30.31 | 33.33 |
| CDY66972 | Canola | nucleus | 23.0 | 33.0 |
| CDX86461 | Canola | nucleus | 24.39 | 31.11 |
| CDY05636 | Canola | nucleus | 29.62 | 29.31 |
| CDY00035 | Canola | nucleus | 32.06 | 27.88 |
| CDX83327 | Canola | nucleus | 34.15 | 27.84 |
| CDX95725 | Canola | nucleus | 34.15 | 27.76 |
| CDY44571 | Canola | nucleus | 24.04 | 27.06 |
| CDY49609 | Canola | nucleus | 32.06 | 26.36 |
| CDX86237 | Canola | nucleus | 30.66 | 25.66 |
| CDX85403 | Canola | nucleus | 30.31 | 25.44 |
| CDY55384 | Canola | nucleus | 25.78 | 25.08 |
| CDX80105 | Canola | nucleus | 26.83 | 23.55 |
| CDY27486 | Canola | plastid | 6.27 | 7.63 |
Protein Annotations
| EnsemblPlants:CDX75478 | EnsemblPlantsGene:GSBRNA2T00121374001 | Gene3D:1.10.10.60 | GO:A0A078CK70 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF741 | PFAM:PF00249 | PFscan:PS51294 | ProteinID:CDX75478 | ProteinID:CDX75478.1 |
| SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI0004EEB3F5 | MapMan:15.5.2.1 | : |
Description
BnaA01g02240D
Coordinates
chrLK031804:-:1264116..1265192
Molecular Weight (calculated)
32916.9 Da
IEP (calculated)
8.245
GRAVY (calculated)
-0.813
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRSPCCEKD HTNKGAWTKE EDDKLVSYIK SHGEGCWRSL PRSAGLLRCG KSCRLRWINY LRPDLKRGNF TLEEDDLIIK LHSLLGNKWS LIATRLPGRT
101: DNEIKNYWNT HVKRKLLRGG IDPMTHRPIN EAKAPRDSSE SRETEDSLVK FLSFSRQLEK KKSFGDEKND QKGLICKKER VEYSLVEEKC LDLNLELRIS
201: PPWQDQQHHD ETKLWFGREK YKCTACRFGL GNGKECSCDN VKCQVEDSSS SSSYSSSDIS SSVIGCYDFL GLKLNTSVLD FSTSEMN
101: DNEIKNYWNT HVKRKLLRGG IDPMTHRPIN EAKAPRDSSE SRETEDSLVK FLSFSRQLEK KKSFGDEKND QKGLICKKER VEYSLVEEKC LDLNLELRIS
201: PPWQDQQHHD ETKLWFGREK YKCTACRFGL GNGKECSCDN VKCQVEDSSS SSSYSSSDIS SSVIGCYDFL GLKLNTSVLD FSTSEMN
001: MGRSPCCEKD HTNKGAWTKE EDDKLISYIK AHGEGCWRSL PRSAGLQRCG KSCRLRWINY LRPDLKRGNF TLEEDDLIIK LHSLLGNKWS LIATRLPGRT
101: DNEIKNYWNT HVKRKLLRKG IDPATHRPIN ETKTSQDSSD SSKTEDPLVK ILSFGPQLEK IANFGDERIQ KRVEYSVVEE RCLDLNLELR ISPPWQDKLH
201: DERNLRFGRV KYRCSACRFG FGNGKECSCN NVKCQTEDSS SSSYSSTDIS SSIGYDFLGL NNTRVLDFST LEMK
101: DNEIKNYWNT HVKRKLLRKG IDPATHRPIN ETKTSQDSSD SSKTEDPLVK ILSFGPQLEK IANFGDERIQ KRVEYSVVEE RCLDLNLELR ISPPWQDKLH
201: DERNLRFGRV KYRCSACRFG FGNGKECSCN NVKCQTEDSS SSSYSSTDIS SSIGYDFLGL NNTRVLDFST LEMK
Arabidopsis Description
MYB32Transcription factor MYB32 [Source:UniProtKB/Swiss-Prot;Acc:O49608]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.